Lam Margaret M C, Hamidian Mehrad
Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, VIC, Australia.
Australian Institute for Microbiology & Infection, University of Technology Sydney, Ultimo, NSW, Australia.
NPJ Antimicrob Resist. 2024 Jan 5;2(1):1. doi: 10.1038/s44259-023-00019-y.
Acinetobacter baumannii is a Gram-negative pathogen responsible for hospital-acquired infections with high levels of antimicrobial resistance (AMR). The spread of multidrug-resistant A. baumannii strains has become a global concern. Spread of AMR in A. baumannii is primarily mediated by the acquisition of AMR genes through mobile genetic elements, such as plasmids. Thus, a comprehensive understanding of the role of different plasmid types in disseminating AMR genes is essential. Here, we analysed the distribution of plasmid types, sampling sources, geographic locations, and AMR genes carried on A. baumannii plasmids. A collection of 813 complete plasmid entries was collated and analysed. We previously devised an Acinetobacter Plasmid Typing (APT) scheme where rep types were defined using 95% nucleotide identity and updated the scheme in this study by adding 12 new rep/Rep types (90 types in total). The APT scheme now includes 178 unique Rep variants belonging to three families: R1, R3, and RP. R1-type plasmids were mainly associated with global clone 1 strains, while R3-type plasmids were highly diverse and carried a variety of AMR determinants including carbapenem, aminoglycoside and colistin resistance genes. Similarly, RP-type and rep-less plasmids were identified as important carriers of aminoglycoside and carbapenem resistance genes. This study provides a comprehensive overview of the distribution and characteristics of A. baumannii plasmids, shedding light on their role in the dissemination of AMR genes. The updated APT scheme and findings enhance our understanding of the molecular epidemiology of A. baumannii and provide valuable insights for surveillance and control strategies.
鲍曼不动杆菌是一种革兰氏阴性病原体,可导致医院获得性感染,且具有高度的抗菌耐药性(AMR)。多重耐药鲍曼不动杆菌菌株的传播已成为全球关注的问题。鲍曼不动杆菌中AMR的传播主要是通过移动遗传元件(如质粒)获取AMR基因介导的。因此,全面了解不同质粒类型在传播AMR基因中的作用至关重要。在此,我们分析了鲍曼不动杆菌质粒的质粒类型分布、采样来源、地理位置以及携带的AMR基因。整理并分析了813个完整的质粒条目。我们之前设计了一种不动杆菌质粒分型(APT)方案,其中rep类型是使用95%的核苷酸同一性定义的,并在本研究中通过添加12种新的rep/Rep类型(总共90种类型)对该方案进行了更新。APT方案现在包括属于三个家族的178个独特的Rep变体:R1、R3和RP。R1型质粒主要与全球克隆1菌株相关,而R3型质粒高度多样,携带多种AMR决定因素,包括碳青霉烯类、氨基糖苷类和黏菌素耐药基因。同样,RP型和无rep质粒被确定为氨基糖苷类和碳青霉烯类耐药基因的重要载体。本研究全面概述了鲍曼不动杆菌质粒的分布和特征,揭示了它们在AMR基因传播中的作用。更新后的APT方案和研究结果增强了我们对鲍曼不动杆菌分子流行病学的理解,并为监测和控制策略提供了有价值的见解。