Zhou Shaoqun, Ma Yongshuo, Shang Yi, Qi Xiaoquan, Huang Sanwen, Li Jiayang
Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, Guangdong 518120, China.
Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Life Metab. 2022 Aug 25;1(2):109-121. doi: 10.1093/lifemeta/loac019. eCollection 2022 Oct.
Plants are talented biochemists that produce a broad diversity of small molecules. These so-called specialized metabolites (SMs) play critical roles in the adaptive evolution of plants to defend against biotic and abiotic stresses, attract pollinators, and modulate soil microbiota for their own benefits. Many plant SMs have been used as nutrition and flavor compounds in our daily food, as well as drugs for treatment of human diseases. Current multi-omics tools have significantly accelerated the process of biosynthetic pathway elucidation in plants through correlation analyses, genetic mapping, and biosynthetic gene cluster predictions. Understanding the biosynthesis of plant SMs has enabled reconstitution of naturally occurring specialized metabolic pathways in microbial hosts, providing a sustainable supply of these high-value molecules. In this review, we illustrate the general functions of several typical plant SMs in natural ecosystems and for human societies. We then provide an overview of current methods elucidating the biosynthetic pathways of plant SMs, and synthetic biology strategies that optimize the efficiency of heterologous biosynthetic pathways in microbial hosts. Moving forward, dissection of the functions and application of plant SMs by using current multidiscipline approaches would be greatly benefit to the scientific community and human societies.
植物是有天赋的生物化学家,能产生种类繁多的小分子。这些所谓的特殊代谢产物(SMs)在植物的适应性进化中发挥着关键作用,以抵御生物和非生物胁迫、吸引传粉者,并调节土壤微生物群以使其自身受益。许多植物特殊代谢产物已在我们的日常食物中用作营养和风味化合物,以及用于治疗人类疾病的药物。当前的多组学工具通过关联分析、遗传定位和生物合成基因簇预测,显著加速了植物生物合成途径的阐明过程。了解植物特殊代谢产物的生物合成,使得在微生物宿主中重建天然存在的特殊代谢途径成为可能,从而为这些高价值分子提供可持续的供应。在这篇综述中,我们阐述了几种典型植物特殊代谢产物在自然生态系统和人类社会中的一般功能。然后,我们概述了当前阐明植物特殊代谢产物生物合成途径的方法,以及优化微生物宿主中异源生物合成途径效率的合成生物学策略。展望未来,利用当前的多学科方法剖析植物特殊代谢产物的功能和应用,将极大地造福科学界和人类社会。