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转录组分析揭示了波纹巴非蛤应对急性热应激的分子机制。

Transcriptome analysis reveals molecular mechanism of Dosinia corrugata in response to acute heat stress.

作者信息

Gao Changsheng, Nie Hongtao

机构信息

College of Fisheries and Life Science, Dalian Ocean University, Dalian 116023, China; Engineering and Technology Research Center of Shellfish Breeding in Liaoning Province, Dalian Ocean University, Dalian 116023, China.

College of Fisheries and Life Science, Dalian Ocean University, Dalian 116023, China; Engineering and Technology Research Center of Shellfish Breeding in Liaoning Province, Dalian Ocean University, Dalian 116023, China.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2025 Jun;54:101426. doi: 10.1016/j.cbd.2025.101426. Epub 2025 Jan 24.

Abstract

This study seeks to explore the molecular regulatory mechanism within Dosinia corrugata in response to extreme high-temperature conditions, aiming to enhance the sustainable development of the D. corrugata aquaculture industry. To identify heat-responsive genes and elucidate adaptive mechanisms, we conducted transcriptional profiling of D. corrugata gills after 12 h and 24 h of acute heat stress. At 12 h and 24 h under acute heat stress, we detected 6842 and 1112 differentially expressed genes (DEGs), respectively. KEGG (Kyoto Encyclopedia of Genes and Genomes) enrichment analysis revealed that co-enriched pathways at both time points included Apoptosis-multiple species, Ubiquitin-mediated proteolysis, Tumor Necrosis Factor (TNF) signaling pathway, and Retinoic acid-inducible Gene I (RIG-I)-like receptor signaling pathway in response to acute heat stress. It is noteworthy that at 12 h of acute heat stress, metabolic pathways were significantly enriched, while at 24 h, immune-related pathways showed significant enrichment. Based on the co-enrichment pathways identified at both time points during acute heat stress (12 h and 24 h), we constructed a potential regulatory network for differentially expressed genes under heat stress. This study offers valuable insights into comprehending the potential molecular regulatory mechanisms that underlie D. corrugata's response to elevated temperatures.

摘要

本研究旨在探索波纹巴非蛤应对极端高温条件下的分子调控机制,以促进波纹巴非蛤养殖业的可持续发展。为了鉴定热响应基因并阐明适应机制,我们对急性热应激12小时和24小时后的波纹巴非蛤鳃进行了转录谱分析。在急性热应激12小时和24小时时,我们分别检测到6842个和1112个差异表达基因(DEG)。京都基因与基因组百科全书(KEGG)富集分析表明,两个时间点共同富集的途径包括多物种凋亡、泛素介导的蛋白水解、肿瘤坏死因子(TNF)信号通路以及维甲酸诱导基因I(RIG-I)样受体信号通路,以响应急性热应激。值得注意的是,在急性热应激12小时时,代谢途径显著富集,而在24小时时,免疫相关途径显著富集。基于急性热应激(12小时和24小时)两个时间点鉴定出的共同富集途径,我们构建了热应激下差异表达基因的潜在调控网络。本研究为理解波纹巴非蛤对温度升高响应的潜在分子调控机制提供了有价值的见解。

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