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古菌信号网络——对产甲烷古菌嗜乙酸甲烷八叠球菌组氨酸激酶和应答调节因子的结构与功能的新见解。

Archaeal Signalling Networks-New Insights Into the Structure and Function of Histidine Kinases and Response Regulators of the Methanogenic Archaeon Methanosarcina acetivorans.

作者信息

Georgiev Nora F K, Andersson Anne L, Ruppe Zoe, Kattwinkel Loriana, Frankenberg-Dinkel Nicole

机构信息

Department of Microbiology, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau, Kaiserslautern, Germany.

出版信息

Environ Microbiol. 2025 Feb;27(2):e70047. doi: 10.1111/1462-2920.70047.

Abstract

The methanogenic archaeon Methanosarcina acetivorans has one of the largest known archaeal genomes. With 53 histidine kinases (HK), it also has the largest set of signal transduction systems. To gain insight into the hitherto not very well understood signal transduction in Archaea and M. acetivorans in particular, we have categorised the predicted HK into four types based on their H-box using an in silico analysis. Representatives of three types were recombinantly produced in Escherichia coli and purified by affinity chromatography. All investigated kinases showed ATP binding and hydrolysis. The MA_type 2 kinase, which lacks the classical H-box, showed no autokinase activity. Furthermore, we could show that M. acetivorans possesses an above-average number of response regulators (RR), consisting of only a REC domain (REC-only). Using the hybrid kinase MA4377 as an example we show that both intra-and intermolecular transphosphorylation to REC domains occur. These experiments are furthermore indicative of complex phosphorelay systems in M. acetivorans and suggest that REC-only proteins act as a central hub in signal transduction in M. acetivorans.

摘要

产乙酸嗜甲烷古菌(Methanosarcina acetivorans)拥有已知最大的古菌基因组之一。它还拥有53个组氨酸激酶(HK),是信号转导系统数量最多的。为了深入了解古菌尤其是产乙酸嗜甲烷古菌中迄今尚未完全理解的信号转导,我们通过计算机分析,根据其H盒将预测的组氨酸激酶分为四类。其中三种类型的代表在大肠杆菌中重组表达,并通过亲和层析进行纯化。所有研究的激酶都显示出ATP结合和水解活性。缺乏经典H盒的MA_type 2激酶没有自激酶活性。此外,我们发现产乙酸嗜甲烷古菌拥有高于平均数量的响应调节因子(RR),这些调节因子仅由一个REC结构域(仅REC)组成。以杂交激酶MA4377为例,我们表明分子内和分子间的磷酸化都会发生在REC结构域上。这些实验还表明产乙酸嗜甲烷古菌中存在复杂的磷酸传递系统,并表明仅含REC的蛋白在产乙酸嗜甲烷古菌的信号转导中起着核心枢纽的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6803/11784639/54e52952cc74/EMI-27-e70047-g004.jpg

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