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SOS 反应的快照揭示了 LexA 自蛋白酶解的结构要求。

Snapshots of SOS response reveal structural requisites for LexA autoproteolysis.

作者信息

Vascon Filippo, De Felice Sofia, Gasparotto Matteo, Huber Stefan T, Catalano Claudio, Chinellato Monica, Mezzetti Riccardo, Grinzato Alessandro, Filippini Francesco, Maso Lorenzo, Jakobi Arjen J, Cendron Laura

机构信息

Department of Biology, University of Padua, Via Ugo Bassi 58/b, 35131 Padova, Italy.

Department of Translational Brain Research, Central Institute of Mental Health (ZI), University of Heidelberg/Medical Faculty Mannheim, 68159 Mannheim, Germany.

出版信息

iScience. 2025 Jan 2;28(2):111726. doi: 10.1016/j.isci.2024.111726. eCollection 2025 Feb 21.

DOI:10.1016/j.isci.2024.111726
PMID:39898034
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11787620/
Abstract

Antimicrobial resistance poses a severe threat to human health and stands out among the pathogens responsible for this emergency. The SOS response to DNA damage is crucial in bacterial evolution, influencing resistance development and adaptability in challenging environments, especially under antibiotic exposure. Recombinase A (RecA) and the transcriptional repressor LexA are the key players that orchestrate this process, determining either the silencing or the active transcription of the genes under their control. By integrating state-of-the-art structural approaches with binding and functional assays, we elucidated the molecular events activating the SOS response in , focusing on the RecA-LexA interaction. Our findings identify the conserved determinants and strength of the interactions that allow RecA to trigger LexA autocleavage and inactivation. These results provide the groundwork for designing novel antimicrobial strategies and exploring the potential translation of -derived approaches, to address the implications of infections.

摘要

抗菌耐药性对人类健康构成严重威胁,在引发这一紧急情况的病原体中尤为突出。对DNA损伤的SOS反应在细菌进化中至关重要,影响耐药性的发展以及在具有挑战性的环境中的适应性,尤其是在抗生素暴露的情况下。重组酶A(RecA)和转录阻遏物LexA是协调这一过程的关键因素,决定着其控制下基因的沉默或活性转录。通过将最先进的结构方法与结合和功能分析相结合,我们阐明了激活大肠杆菌SOS反应的分子事件,重点关注RecA-LexA相互作用。我们的研究结果确定了使RecA触发LexA自切割和失活的相互作用的保守决定因素和强度。这些结果为设计新型抗菌策略以及探索源自大肠杆菌的方法的潜在转化奠定了基础,以应对大肠杆菌感染的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/d84525dffecb/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/e88e55035be6/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/05a4bcb0bb81/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/99818e550160/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/5d41a481e510/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/d84525dffecb/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/e88e55035be6/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/05a4bcb0bb81/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/99818e550160/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/5d41a481e510/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06e9/11787620/d84525dffecb/gr4.jpg

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本文引用的文献

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The LexA-RecA* structure reveals a cryptic lock-and-key mechanism for SOS activation.LexA-RecA* 结构揭示了 SOS 激活的隐蔽锁钥机制。
Nat Struct Mol Biol. 2024 Oct;31(10):1522-1531. doi: 10.1038/s41594-024-01317-3. Epub 2024 May 16.
2
Homology recognition without double-stranded DNA-strand separation in D-loop formation by RecA.RecA 形成 D 环过程中无需双链 DNA 链分离的同源识别。
Nucleic Acids Res. 2024 Mar 21;52(5):2565-2577. doi: 10.1093/nar/gkad1260.
3
The CCP4 suite: integrative software for macromolecular crystallography.
Ccp4 套件:用于大分子晶体学的集成软件。
Acta Crystallogr D Struct Biol. 2023 Jun 1;79(Pt 6):449-461. doi: 10.1107/S2059798323003595. Epub 2023 May 30.
4
Structural basis for regulation of SOS response in bacteria.细菌中 SOS 反应调控的结构基础。
Proc Natl Acad Sci U S A. 2023 Jan 10;120(2):e2217493120. doi: 10.1073/pnas.2217493120. Epub 2023 Jan 4.
5
Engineered RecA Constructs Reveal the Minimal SOS Activation Complex.工程化 RecA 构建体揭示最小 SOS 激活复合物。
Biochemistry. 2022 Dec 20;61(24):2884-2896. doi: 10.1021/acs.biochem.2c00505. Epub 2022 Dec 6.
6
Sending out an SOS - the bacterial DNA damage response.发出求救信号——细菌的DNA损伤反应。
Genet Mol Biol. 2022 Oct 10;45(3 Suppl 1):e20220107. doi: 10.1590/1678-4685-GMB-2022-0107. eCollection 2022.
7
Nanobodies targeting LexA autocleavage disclose a novel suppression strategy of SOS-response pathway.靶向 LexA 自我切割的纳米体揭示了 SOS 反应途径的一种新抑制策略。
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8
Electron scattering properties of biological macromolecules and their use for cryo-EM map sharpening.生物大分子的电子散射性质及其在冷冻电镜图谱锐化中的应用。
Faraday Discuss. 2022 Nov 8;240(0):168-183. doi: 10.1039/d2fd00078d.
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Microorganisms. 2022 Jul 9;10(7):1385. doi: 10.3390/microorganisms10071385.
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