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FireVoxel:用于动态医学图像多模态分析的交互式软件。

FireVoxel: Interactive Software for Multi-Modality Analysis of Dynamic Medical Images.

作者信息

Mikheev Artem, DiMartino Joseph M, Bokacheva Louisa, Rusinek Henry

机构信息

Department of Radiology, NYU Grossman School of Medicine, 660 First Ave, Rm. 413, New York, NY, 10016, USA.

Department of Neurology, NYU Grossman School of Medicine, New York, NY, 10016, USA.

出版信息

J Imaging Inform Med. 2025 Feb 3. doi: 10.1007/s10278-025-01404-x.

Abstract

This article provides an overview of the FireVoxel software for quantitative analysis of medical images and its applications in the field. We describe FireVoxel's user interface, multi-layer design, dynamic parametric models, and several turn-key workflows. Additionally, we discuss its application in recent imaging projects. We outline basic image analysis tools such as segmentation, non-uniformity correction, and coregistration through a pictorial overview, with a focus on deformable coregistration and motion correction. Several example workflows and image-based dynamic modeling are also highlighted. Furthermore, we analyze peer-reviewed studies that utilized FireVoxel for image processing, categorizing published papers based on body structures/organs, image processing methods, and imaging modalities. For comparison, we searched the Ovid MEDLINE database to assess the general use of medical image analysis software. FireVoxel is used by over 3000 users worldwide, with 528 articles, including 413 in English, published in the past 15 years. MRI is the most commonly used imaging modality (78.2%), followed by CT (14.5%) and PET (7.3%). The most frequently used methods are dynamic modeling, segmentation, texture analysis, and coregistration. FireVoxel is commonly used in abdominal and genitourinary imaging studies, where it appears to fill a niche due to the lack of alternative software. The search of the Ovid MEDLINE suggests that quantitative medical imaging studies, on the other hand, focus on the brain and cardiovascular system. FireVoxel offers an effective set of quantitative tools, particularly for abdominal and genitourinary imaging, likely due to its ability to manage patient motion and correct for MR artifacts. The software is especially valuable for processing dynamic studies. The steady increase in publications utilizing FireVoxel reflects growing interest in this software and its relevance for image-based research.

摘要

本文概述了用于医学图像定量分析的FireVoxel软件及其在该领域的应用。我们描述了FireVoxel的用户界面、多层设计、动态参数模型以及几个交钥匙工作流程。此外,我们讨论了它在最近成像项目中的应用。我们通过图示概述了基本的图像分析工具,如分割、非均匀性校正和配准,重点是可变形配准和运动校正。还突出了几个示例工作流程和基于图像的动态建模。此外,我们分析了利用FireVoxel进行图像处理的同行评审研究,根据身体结构/器官、图像处理方法和成像方式对已发表的论文进行分类。为了进行比较,我们搜索了Ovid MEDLINE数据库,以评估医学图像分析软件的一般使用情况。FireVoxel在全球拥有超过3000名用户,在过去15年里发表了528篇文章,其中包括413篇英文文章。MRI是最常用的成像方式(78.2%),其次是CT(14.5%)和PET(7.3%)。最常用的方法是动态建模、分割、纹理分析和配准。FireVoxel常用于腹部和泌尿生殖系统成像研究,由于缺乏替代软件,它似乎填补了一个空白。另一方面,对Ovid MEDLINE的搜索表明,定量医学成像研究主要集中在大脑和心血管系统。FireVoxel提供了一套有效的定量工具,特别是对于腹部和泌尿生殖系统成像,这可能是由于它能够处理患者运动并校正MR伪影。该软件对于处理动态研究特别有价值。利用FireVoxel的出版物稳步增加,反映出对该软件的兴趣日益增长及其与基于图像的研究的相关性。

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