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由晚期胚胎发生丰富蛋白设计的短肽环化以提高稳定性和功能性

Cyclization of Short Peptides Designed from Late Embryogenesis Abundant Protein to Improve Stability and Functionality.

作者信息

Wu Yinghan, Ikeno Shinya

机构信息

Department of Biological Functions Engineering, Kyushu Institute of Technology, Kitakyushu Science and Research Park, Kitakyushu, Fukuoka, Japan.

出版信息

Chembiochem. 2025 Apr 14;26(8):e202401013. doi: 10.1002/cbic.202401013. Epub 2025 Feb 20.

DOI:10.1002/cbic.202401013
PMID:39912732
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12007072/
Abstract

LEA peptides, which are designed based on late embryogenic abundant (LEA) protein sequences, have demonstrated chaperone-like functions, such as improving drought stress tolerance of Escherichia coli (E. coli). Previous studies have focused on the biological functions of linear LEA peptides. However, the function of cyclic LEA peptide still unknown. This study aimed to explore the cyclic LEA peptides' bio function like enhance the drought stress tolerance of E. coli by cyclizing the LEA peptide using SICLOPPS (Split Intein Circular Ligation of Peptides and Proteins). The results indicated that cyclization significantly improved the function and extended the potential applications. At the same time, we found that peptides containing numerous lysine residues exhibited reduced performance, which may be due to the exteins' residues affecting the SICLOPPS efficiency.

摘要

基于胚胎后期丰富(LEA)蛋白序列设计的LEA肽已显示出类似伴侣蛋白的功能,例如提高大肠杆菌对干旱胁迫的耐受性。先前的研究主要集中在线性LEA肽的生物学功能上。然而,环状LEA肽的功能仍然未知。本研究旨在通过使用肽和蛋白质的分裂内含子环化连接法(SICLOPPS)环化LEA肽来探索环状LEA肽的生物功能,如增强大肠杆菌对干旱胁迫的耐受性。结果表明,环化显著改善了其功能并扩展了潜在应用。同时,我们发现含有大量赖氨酸残基的肽表现出性能下降,这可能是由于外显肽的残基影响了SICLOPPS效率。

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1
Cyclization of Short Peptides Designed from Late Embryogenesis Abundant Protein to Improve Stability and Functionality.由晚期胚胎发生丰富蛋白设计的短肽环化以提高稳定性和功能性
Chembiochem. 2025 Apr 14;26(8):e202401013. doi: 10.1002/cbic.202401013. Epub 2025 Feb 20.
2
In vivo expression of a short peptide designed from late embryogenesis abundant protein for enhancing abiotic stress tolerance in Escherichia coli.一种基于胚胎后期丰富蛋白设计的短肽在大肠杆菌中的体内表达,用于增强非生物胁迫耐受性
Biochem Biophys Res Commun. 2017 Oct 21;492(3):386-390. doi: 10.1016/j.bbrc.2017.08.091. Epub 2017 Aug 24.
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Split-intein mediated circular ligation used in the synthesis of cyclic peptide libraries in E. coli.分裂内含肽介导的环化连接用于在大肠杆菌中合成环肽文库。
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本文引用的文献

1
Self-cyclisation as a general and efficient platform for peptide and protein macrocyclisation.自环化作为肽和蛋白质大环化的通用且高效平台。
Commun Chem. 2023 Mar 4;6(1):48. doi: 10.1038/s42004-023-00841-5.
2
Protein aggregation and glycation in Escherichia coli exposed to desiccation-rehydration stress.暴露于脱水-复水应激下的大肠杆菌中的蛋白质聚集和糖基化
Microbiol Res. 2023 May;270:127335. doi: 10.1016/j.micres.2023.127335. Epub 2023 Feb 16.
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LEA motifs promote desiccation tolerance in vivo.LEA 基序促进体内的干燥耐受性。
BMC Biol. 2021 Dec 14;19(1):263. doi: 10.1186/s12915-021-01176-0.
4
Group 3 LEA Protein Model Peptides Suppress Heat-Induced Lysozyme Aggregation. Elucidation of the Underlying Mechanism Using Coarse-Grained Molecular Simulations.第3组LEA蛋白模型肽抑制热诱导的溶菌酶聚集。使用粗粒度分子模拟阐明潜在机制。
J Phys Chem B. 2020 Apr 9;124(14):2747-2759. doi: 10.1021/acs.jpcb.9b11000. Epub 2020 Mar 30.
5
A Short Peptide Designed from Late Embryogenesis Abundant Protein Enhances Acid Tolerance in Escherichia coli.一种源自晚期胚胎丰富蛋白的短肽增强大肠杆菌的耐酸性。
Appl Biochem Biotechnol. 2020 May;191(1):164-176. doi: 10.1007/s12010-020-03262-5. Epub 2020 Feb 25.
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Metabolic Changes on the Acquisition of Desiccation Tolerance in Seeds of the Brazilian Native Tree .巴西本土树种种子获得耐旱性过程中的代谢变化
Front Plant Sci. 2019 Oct 23;10:1356. doi: 10.3389/fpls.2019.01356. eCollection 2019.
7
Escherichia coli tolerance of ultraviolet radiation by in vivo expression of a short peptide designed from late embryogenesis abundant protein.大肠杆菌通过体内表达晚期胚胎丰富蛋白设计的短肽来耐受紫外线辐射。
Biochem Biophys Res Commun. 2018 Sep 5;503(2):910-914. doi: 10.1016/j.bbrc.2018.06.095. Epub 2018 Jun 23.
8
SWISS-MODEL: homology modelling of protein structures and complexes.SWISS-MODEL:蛋白质结构和复合物的同源建模。
Nucleic Acids Res. 2018 Jul 2;46(W1):W296-W303. doi: 10.1093/nar/gky427.
9
In vivo expression of a short peptide designed from late embryogenesis abundant protein for enhancing abiotic stress tolerance in Escherichia coli.一种基于胚胎后期丰富蛋白设计的短肽在大肠杆菌中的体内表达,用于增强非生物胁迫耐受性
Biochem Biophys Res Commun. 2017 Oct 21;492(3):386-390. doi: 10.1016/j.bbrc.2017.08.091. Epub 2017 Aug 24.
10
Construction and characterization of mutated LEA peptides in Escherichia coli to develop an efficient protein expression system.在大肠杆菌中构建和表征突变型胚胎发育晚期丰富蛋白(LEA)肽以开发高效蛋白质表达系统。
J Mol Recognit. 2018 Jan;31(1). doi: 10.1002/jmr.2658. Epub 2017 Aug 23.