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生物发光微生物生物传感器:个人观点。

Bioluminescent Microbial Bioreporters: A Personal Perspective.

作者信息

Belkin Shimshon

机构信息

Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 9190401, Israel.

出版信息

Biosensors (Basel). 2025 Feb 14;15(2):111. doi: 10.3390/bios15020111.

DOI:10.3390/bios15020111
PMID:39997013
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11853290/
Abstract

This review attempts to summarize my three decades-long involvement in, and contribution to, the design, construction and testing of bioluminescent microbial sensor strains (bioreporters). With the understanding that such a document cannot be completely free of bias, the review focuses on studies from my own lab only, with almost no coverage of the parallel progress made by others in similar fields. This admittedly subjective approach by no way detracts from the achievements of countless excellent researchers who are not mentioned here, and whose contributions to the field are at least as important as that of my own. The review covers basic aspects of microbial sensor design, and then progresses to describe approaches to performance improvement of sensor strains aimed at the detection of either specific chemicals, groups of chemicals sharing similar characteristics, or global effects, such as toxicity and genotoxicity. The need for integration of live sensor cells into a compatible hardware platform is highlighted, as is the importance of long-term maintenance of the cells' viability and activity. The use of multi-member sensors' panels is presented as a means for enhancing the detection spectrum and sample "fingerprinting", along with a list of different purposes to which such sensors have been put to use.

摘要

本综述试图总结我三十年来在生物发光微生物传感器菌株(生物报告器)的设计、构建和测试方面的参与情况及所做贡献。鉴于这样一份文档不可能完全没有偏见,本综述仅聚焦于我自己实验室的研究,几乎没有涉及其他在类似领域取得的平行进展。诚然,这种主观的方法丝毫不减损无数未在此提及的优秀研究人员的成就,他们对该领域的贡献至少与我自己的一样重要。该综述涵盖了微生物传感器设计的基本方面,接着描述了旨在检测特定化学物质、具有相似特征的化学物质组或诸如毒性和遗传毒性等全局效应的传感器菌株性能改进方法。强调了将活的传感器细胞整合到兼容硬件平台的必要性,以及长期维持细胞活力和活性的重要性。还介绍了使用多成员传感器面板作为拓宽检测范围和进行样本“指纹识别”的一种手段,以及此类传感器已被用于的一系列不同目的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4e/11853290/89f3ca81b3bd/biosensors-15-00111-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4e/11853290/37a86238e4f3/biosensors-15-00111-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4e/11853290/89f3ca81b3bd/biosensors-15-00111-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4e/11853290/37a86238e4f3/biosensors-15-00111-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4e/11853290/89f3ca81b3bd/biosensors-15-00111-g002.jpg

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本文引用的文献

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Microbial biosensors for diagnostics, surveillance and epidemiology: Today's achievements and tomorrow's prospects.微生物生物传感器在诊断、监测和流行病学中的应用:今日的成就与明日的展望。
Microb Biotechnol. 2024 Nov;17(11):e70047. doi: 10.1111/1751-7915.70047.
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A Microbial Cocaine Bioreporter.一种微生物可卡因生物报告器。
Sensors (Basel). 2024 Oct 11;24(20):6549. doi: 10.3390/s24206549.
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Principles and challenges of whole cell microbial biosensors in the food industry.食品工业中全细胞微生物生物传感器的原理及挑战。
J Food Sci. 2024 Sep;89(9):5255-5269. doi: 10.1111/1750-3841.17294. Epub 2024 Aug 22.
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Enhanced Detection of Estrogen-like Compounds by Genetically Engineered Yeast Sensor Strains.基因工程酵母传感器菌株增强检测类雌激素化合物。
Biosensors (Basel). 2024 Apr 15;14(4):193. doi: 10.3390/bios14040193.
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Performance upgrade of a microbial explosives' sensor strain by screening a high throughput saturation library of a transcriptional regulator.通过筛选转录调节因子的高通量饱和文库对微生物炸药传感器菌株进行性能升级。
Comput Struct Biotechnol J. 2023 Aug 22;21:4252-4260. doi: 10.1016/j.csbj.2023.08.017. eCollection 2023.
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Miniaturized bioluminescent whole-cell sensor systems.微型化生物发光全细胞传感器系统。
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Synthetic nonlinear computation for genetic circuit design.遗传电路设计中的合成非线性计算。
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Introduction of quorum sensing elements into bacterial bioreporter circuits enhances explosives' detection capabilities.将群体感应元件引入细菌生物报告器电路可增强爆炸物检测能力。
Eng Life Sci. 2022 Mar 2;22(3-4):308-318. doi: 10.1002/elsc.202100134. eCollection 2022 Mar.
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Enhancing DNT Detection by a Bacterial Bioreporter: Directed Evolution of the Transcriptional Activator YhaJ.利用细菌生物报告基因增强双核苷酸多态性检测:转录激活因子YhaJ的定向进化
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Sense and sensibility: of synthetic biology and the redesign of bioreporter circuits.理性与感性:合成生物学与生物报告基因回路的重新设计
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