Yang Peng, Ma Xingchi, Zhang Yu, Sun Yanan, Yu Hao, Han Jiandong, Ma Meng, Wan Luzhang, Cheng Fansheng
Institute of Agricultural Resources and Environment, Shandong Academy of Agricultural Science, Jinan 250100, China.
Key Laboratory of Wastes Matrix Utilization, Ministry of Agriculture and Rural Affairs, Jinan 250100, China.
J Fungi (Basel). 2025 Feb 4;11(2):115. doi: 10.3390/jof11020115.
is a newly identified species of wood-rotting fungi, with substantial aspects of its biology and ecological function yet to be clarified. A Nanopore third-generation sequencer was employed for de novo genome assembly to examine the genetic characteristics. The genome consisted of 35.93 Mb in 46 contigs with a scaffold N50 of 4.384 Mb. Glycoside hydrolases and activities enzymes accounted for a large proportion of the 522 identified carbohydrate-active enzymes (CAZymes), suggesting a strong wood degradation ability. Phylogenetic and comparative analysis revealed a close evolutionary relationship between and . and exhibited significant collinear inter-species genome alignment. Based on transcriptome and metabolomic analyses, showed a greater ability to utilize sucrose over sawdust as a carbon source, enhancing its growth by activating glycolysis/gluconeogenesis and the citrate cycle. However, compared with sucrose, sawdust as a carbon source activated amino acid biosynthesis and the production of various secondary metabolites, including diterpenoid, indole alkaloid, folate, porphyrin, and biotin metabolism. The study establishes a theoretical basis for research and applications in biological processes, demonstrating a strategy to modulate the production of secondary metabolites by altering its carbon sources in .
是一种新发现的木材腐朽真菌物种,其生物学和生态功能的许多方面尚待阐明。采用纳米孔第三代测序仪进行从头基因组组装以研究其遗传特征。基因组由46个重叠群组成,大小为35.93 Mb,支架N50为4.384 Mb。糖苷水解酶和活性酶在522种已鉴定的碳水化合物活性酶(CAZymes)中占很大比例,表明其具有很强的木材降解能力。系统发育和比较分析揭示了与之间密切的进化关系。和表现出显著的种间基因组共线性比对。基于转录组和代谢组分析,与锯末相比,表现出更强的利用蔗糖作为碳源的能力,通过激活糖酵解/糖异生作用和柠檬酸循环来促进其生长。然而,与蔗糖相比,锯末作为碳源激活了氨基酸生物合成以及各种次生代谢产物的产生,包括二萜类、吲哚生物碱、叶酸、卟啉和生物素代谢。该研究为生物过程的研究和应用建立了理论基础,展示了一种通过改变其碳源来调节次生代谢产物产量的策略。