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木质纤维素酶的蛋白质组学特征 由日本北部森林中分离出的与昆虫相关的真菌 oita 分泌。

Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus oita, Isolated from a Forest in Northern Japan.

机构信息

Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan

Research Faculty of Engineering, Hokkaido University, Sapporo, Japan.

出版信息

Appl Environ Microbiol. 2020 Apr 1;86(8). doi: 10.1128/AEM.02350-19.

Abstract

Wood-devastating insects utilize their symbiotic microbes with lignocellulose-degrading abilities to extract energy from recalcitrant woods. It is well known that free-living lignocellulose-degrading fungi secrete various carbohydrate-active enzymes (CAZymes) to degrade plant cell wall components, mainly cellulose, hemicellulose, and lignin. However, CAZymes from insect-symbiotic fungi have not been well documented except for a few examples. In this study, an insect-associated fungus, oita, was isolated as a potential symbiotic fungus of female captured from Hokkaido forest. This fungus was grown in seven different media containing a single carbon source, glucose, cellulose, xylan, mannan, pectin, poplar, or larch, and the secreted proteins were identified by liquid chromatography-tandem mass spectrometry (LC-MS/MS). A total of 128 CAZymes, including domains of 92 glycoside hydrolases, 15 carbohydrate esterases, 5 polysaccharide lyases, 17 auxiliary activities, and 11 carbohydrate-binding modules, were identified, and these are involved in degradation of cellulose and hemicellulose but not lignin. Together with the results of polysaccharide-degrading activity measurements, we concluded that oita tightly regulates the expression of these CAZymes in response to the tested plant cell wall materials. Overall, this study described the detailed proteomic approach of a woodwasp-associated fungus and revealed that the new isolate, oita, secretes diverse CAZymes to efficiently degrade lignocellulose in the symbiotic environment. Recent studies show the potential impacts of insect symbiont microbes on biofuel application with regard to their degradation capability of a recalcitrant plant cell wall. In this study, we describe a novel fungal isolate, oita, as a single symbiotic fungus from the woodwasp found in the northern forests of Japan. Our detailed secretome analyses of oita, together with activity measurements, reveal that this insect-associated fungus exhibits high and broad activities for plant cell wall material degradation, suggesting potential applications within the biomass conversion industry for plant mass degradation.

摘要

木质破坏性昆虫利用其具有木质纤维素降解能力的共生微生物从顽固的木材中提取能量。众所周知,自由生活的木质纤维素降解真菌会分泌各种碳水化合物活性酶(CAZymes)来降解植物细胞壁成分,主要是纤维素、半纤维素和木质素。然而,除了少数几个例子外,昆虫共生真菌的 CAZymes 并没有得到很好的记录。在这项研究中,从北海道森林中捕获的雌性 中分离出一种与昆虫相关的真菌 oita,作为其潜在的共生真菌。该真菌在七种不同的培养基中生长,这些培养基含有单一的碳源,如葡萄糖、纤维素、木聚糖、甘露聚糖、果胶、杨树或落叶松,并用液相色谱-串联质谱(LC-MS/MS)鉴定分泌蛋白。共鉴定出 128 种 CAZymes,包括 92 种糖苷水解酶、15 种糖基酯酶、5 种多糖裂解酶、17 种辅助活性和 11 种糖基结合模块,这些酶参与纤维素和半纤维素的降解,但不参与木质素的降解。结合多糖降解活性测量的结果,我们得出结论, oita 会根据测试的植物细胞壁材料,紧密调节这些 CAZymes 的表达。总的来说,这项研究描述了一种与木蜂相关的真菌的详细蛋白质组学方法,并揭示了新的分离株 oita 分泌多种 CAZymes 以在共生环境中有效地降解木质纤维素。最近的研究表明,昆虫共生微生物在生物燃料应用方面具有潜在的影响,因为它们具有降解顽固植物细胞壁的能力。在这项研究中,我们描述了一种新型真菌分离株 oita,它是一种从日本北部森林中发现的 木蜂中分离出来的单一共生真菌。我们对 oita 的详细分泌组学分析,以及活性测量结果表明,这种与昆虫相关的真菌对植物细胞壁材料的降解表现出高活性和广谱活性,这表明它在生物质转化行业中具有降解植物物质的潜在应用。

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