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具有增强特异性的 SaurCas9 的工程改造。

Engineering of SauriCas9 with enhanced specificity.

作者信息

Zhang Xiaoqi, Tao Chen, Li Miaomiao, Zhang Sufang, Liang Puping, Huang Yan, Liu Huihui, Wang Yongming

机构信息

Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, School of Life Sciences, Fudan University, Shanghai 200438, China.

Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China.

出版信息

Mol Ther Nucleic Acids. 2025 Jan 17;36(1):102455. doi: 10.1016/j.omtn.2025.102455. eCollection 2025 Mar 11.

DOI:10.1016/j.omtn.2025.102455
PMID:40027883
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11869866/
Abstract

SauriCas9 is a compact Cas9 nuclease showing promise for therapeutic applications. However, concerns about off-target effects necessitated improvements in specificity. We addressed this by introducing mutations to eliminate polar contacts between Cas9 and the target DNA, resulting in the SauriCas9-R253A variant with enhanced specificity. To validate its efficacy, we employed SauriCas9-R253A to disrupt three genes (B2M, TRAC, and PDCD1), a strategy integral to the development of allogeneic chimeric antigen receptor T cell (CAR-T) therapies. Our results demonstrated that the most efficient single-guide RNAs for SauriCas9-R253A exhibited comparable activity to SpCas9 and showed no detectable off-target effects in the disruption of these genes, highlighting its therapeutic potential.

摘要

SauriCas9是一种紧凑的Cas9核酸酶,在治疗应用方面显示出前景。然而,对脱靶效应的担忧使得有必要提高其特异性。我们通过引入突变来消除Cas9与靶DNA之间的极性接触来解决这一问题,从而产生了具有更高特异性的SauriCas9-R253A变体。为了验证其功效,我们使用SauriCas9-R253A破坏三个基因(B2M、TRAC和PDCD1),这是开发同种异体嵌合抗原受体T细胞(CAR-T)疗法不可或缺的策略。我们的结果表明,SauriCas9-R253A最有效的单向导RNA表现出与SpCas9相当的活性,并且在这些基因的破坏中未检测到脱靶效应,突出了其治疗潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/9bd927b106d2/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/abaf59d3c179/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/a245dd733ed7/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/d98384541a53/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/dcd383079587/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/9bd927b106d2/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/abaf59d3c179/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/a245dd733ed7/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/d98384541a53/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/dcd383079587/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c3/11869866/9bd927b106d2/gr4.jpg

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本文引用的文献

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Preclinical evaluation of CRISPR-based therapies for Noonan syndrome caused by deep-intronic variants.基于CRISPR的疗法对由内含子深处变异引起的努南综合征的临床前评估。
Mol Ther Nucleic Acids. 2024 Jan 23;35(1):102123. doi: 10.1016/j.omtn.2024.102123. eCollection 2024 Mar 12.
2
Adenine base editor-based correction of the cardiac pathogenic Lmna c.1621C > T mutation in murine hearts.腺嘌呤碱基编辑器校正心肌致病性 Lmna c.1621C>T 突变的研究
J Cell Mol Med. 2024 Feb;28(4):e18145. doi: 10.1111/jcmm.18145.
3
Engineered Staphylococcus auricularis Cas9 with high-fidelity.
工程化金黄色酿脓葡萄球菌 Cas9 具有高保真度。
FASEB J. 2023 Aug;37(8):e23060. doi: 10.1096/fj.202202132RR.
4
A highly specific CRISPR-Cas12j nuclease enables allele-specific genome editing.一种高度特异性的 CRISPR-Cas12j 核酸酶可实现等位基因特异性基因组编辑。
Sci Adv. 2023 Feb 10;9(6):eabo6405. doi: 10.1126/sciadv.abo6405.
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Genome editing with natural and engineered CjCas9 orthologs.利用天然和工程化的 CjCas9 同源物进行基因组编辑。
Mol Ther. 2023 Apr 5;31(4):1177-1187. doi: 10.1016/j.ymthe.2023.01.029. Epub 2023 Feb 1.
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Identification of SaCas9 orthologs containing a conserved serine residue that determines simple NNGG PAM recognition.鉴定含有保守丝氨酸残基的 SaCas9 同源物,该残基决定了简单的 NNGG PAM 识别。
PLoS Biol. 2022 Nov 30;20(11):e3001897. doi: 10.1371/journal.pbio.3001897. eCollection 2022 Nov.
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Closely related type II-C Cas9 orthologs recognize diverse PAMs.密切相关的 II-C 型 Cas9 同源物识别多种 PAMs。
Elife. 2022 Aug 12;11:e77825. doi: 10.7554/eLife.77825.
8
Efficient in vivo base editing via single adeno-associated viruses with size-optimized genomes encoding compact adenine base editors.通过大小优化的基因组编码紧凑型腺嘌呤碱基编辑器的单个腺相关病毒在体内实现高效碱基编辑。
Nat Biomed Eng. 2022 Nov;6(11):1272-1283. doi: 10.1038/s41551-022-00911-4. Epub 2022 Jul 28.
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Compact SchCas9 Recognizes the Simple NNGR PAM.紧凑型 SpCas9 识别简单的 NNGR PAM。
Adv Sci (Weinh). 2022 Feb;9(4):e2104789. doi: 10.1002/advs.202104789. Epub 2021 Dec 6.
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