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PiRNA和circRNA作为透明细胞肾细胞癌的诊断生物标志物

piRNAs and circRNAs acting as diagnostic biomarkers in clear cell renal cell carcinoma.

作者信息

Xu Yin, Liu Huiling, Zhang Yingzhi, Luo Jing, Li Haomin, Lai Caiyong, Shi Liping, Heng Baoli

机构信息

Department of Urology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu Road, Guangzhou, 510630, China.

Department of Urology, The People's Hospital of Longhua Shenzhen, No. 38, Jianshe East Road, Shenzhen, 518109, China.

出版信息

Sci Rep. 2025 Mar 5;15(1):7774. doi: 10.1038/s41598-025-90874-8.

Abstract

The discovery of diverse functions and mechanisms in cancer has underscored the significance of emerging non-coding RNAs (ncRNAs), such as PIWI-interacting RNAs (piRNAs) and circular RNAs (circRNAs), within the clinical context of cancer. Understanding their role in clear cell renal cell carcinoma (ccRCC) is imperative and necessitates comprehensive investigation. This study aims to further explore the diagnostic potential of piRNAs and circRNAs for ccRCC. The dysregulated piRNAs and circRNAs in ccRCC were identified using small RNA (sRNA) high-throughput sequencing technology, while their expression in clinical samples was assessed by RT-qPCR. A paired t-test was performed to compare the expression levels of piRNAs and circRNAs between ccRCC and adjacent tissues. Additionally, ROC curve analysis was conducted to evaluate the diagnostic specificity, sensitivity, and area under the curve (AUC) of piRNAs and circRNAs. High-throughput sequencing revealed a significant downregulation of 17 piRNAs and 694 circRNAs in ccRCC tissues, accompanied by a significant upregulation of 5 piRNAs and 490 circRNAs. RT-qPCR analysis demonstrated markedly lower expression levels of piR-has-150997, 133872, 132556, 154502, and uniq-84737 in the ccRCC group compared to the adjacent tissue group (p < 0.05). When considering the combined detection of piR-hsa-150997, piR-hsa-133872, piR-hsa-132556, piR-hsa-154502, uniq_84737, circABCC1, circNETO2_006, and circARID1B_037, the diagnostic AUC for ccRCC was found to be high at an approximate value of AUC = 0.878. The diagnostic performance of piR-has-150997, 133872, 132556, 154502, uniq-84737, circABCC1, circNETO2_006, and circARID1B_037 demonstrates promise for ccRCC. A model incorporating piR-hsa-150997, uniq_84737, circABCC1, circNETO2_006, and circARID1B_037 could serve as an ideal diagnostic marker system with significant clinical utility.

摘要

癌症中多种功能和机制的发现凸显了新兴的非编码RNA(ncRNA),如PIWI相互作用RNA(piRNA)和环状RNA(circRNA)在癌症临床背景下的重要性。了解它们在透明细胞肾细胞癌(ccRCC)中的作用势在必行,需要进行全面研究。本研究旨在进一步探索piRNA和circRNA对ccRCC的诊断潜力。使用小RNA(sRNA)高通量测序技术鉴定ccRCC中失调的piRNA和circRNA,同时通过RT-qPCR评估它们在临床样本中的表达。进行配对t检验以比较ccRCC与相邻组织之间piRNA和circRNA的表达水平。此外,进行ROC曲线分析以评估piRNA和circRNA的诊断特异性、敏感性和曲线下面积(AUC)。高通量测序显示ccRCC组织中17种piRNA和694种circRNA显著下调,同时5种piRNA和490种circRNA显著上调。RT-qPCR分析表明,与相邻组织组相比,ccRCC组中piR-has-150997、133872、132556、154502和uniq-84737的表达水平明显较低(p < 0.05)。当考虑联合检测piR-hsa-150997、piR-hsa-133872、piR-hsa-132556、piR-hsa-154502、uniq_84737、circABCC1、circNETO2_006和circARID1B_037时,发现ccRCC的诊断AUC较高,约为AUC = 0.878。piR-has-150997、133872、132556、154502、uniq-84737、circABCC1、circNETO2_006和circARID1B_037的诊断性能显示出对ccRCC的诊断前景。包含piR-hsa-150997、uniq_84737、circABCC1、circNETO2_006和circARID1B_037的模型可作为具有显著临床实用性的理想诊断标志物系统。

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