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来自中国新月弯孢霉的一种新型真菌病毒的分子特征分析

Molecular characterization of a novel mycovirus from Curvularia lunata in China.

作者信息

Ke Bin, Mo Xiaohan, Wu Mengting, Wang Lin, Peng Ru, Lu Yuwen, Peng Jiejun, Rao Shaofei, Wu Guanwei, Chen Jianping, Yan Fei, Zheng Hongying

机构信息

State Key Laboratory for Quality and Safety of Agro-products, Key Laboratory of Biotechnology in Plant Protection of MARA, Zhejiang Key Laboratory of Green Plant Protection, Institute of Plant Virology, Ningbo University, Ningbo, 315211, China.

Yunnan Academy of Tobacco Agricultural Science, Kunming, 650021, China.

出版信息

Arch Virol. 2025 Mar 17;170(4):81. doi: 10.1007/s00705-025-06268-8.

Abstract

A novel mycovirus was identified in Curvularia lunata in China using high-throughput sequencing and RT-PCR, and the virus was named "Curvularia lunata RNA virus 1" (ClRV1). The genome of ClRV1 consists of 3,742 nucleotides and contains two open reading frames (ORFs). In a BLASTn search based on the complete genome sequence of ClRV1, this virus was found to have the most sequence similarity to Erysiphe necator associated umbra-like virus 4 (EnUlV4) (74% identity, 54% query coverage), and BLASTp searches showed that the ClRV1 HP and RdRp shared the highest amino acid sequence identity of 66.5% and 74.7%, respectively, with the corresponding proteins of EnUlV4. Phylogenetic analysis based on RdRp amino acid sequences indicated that ClRV1 grouped together with EnUlV4 and a number of other mycoviruses that have been variously named 'ambiguiviruses', 'mycotombusviruses', and 'umbramycoviruses', which appears to justify the creation of a new order within the phylum Kitrinoviricota. This is the first report of the complete genome sequence of the novel mycovirus ClRV1 infecting Curvularia lunata.

摘要

利用高通量测序和逆转录聚合酶链式反应(RT-PCR)在中国的新月弯孢菌中鉴定出一种新型真菌病毒,并将该病毒命名为“新月弯孢菌RNA病毒1”(ClRV1)。ClRV1的基因组由3742个核苷酸组成,包含两个开放阅读框(ORF)。基于ClRV1完整基因组序列的BLASTn搜索结果显示,该病毒与白粉菌相关的伞状样病毒4(EnUlV4)的序列相似性最高(同一性为74%,查询覆盖率为54%),而BLASTp搜索表明,ClRV1的外壳蛋白(HP)和RNA依赖的RNA聚合酶(RdRp)与EnUlV4的相应蛋白的氨基酸序列同一性分别最高,为66.5%和74.7%。基于RdRp氨基酸序列的系统发育分析表明,ClRV1与EnUlV4以及其他一些被分别命名为“模糊病毒”“真菌葬病毒”和“伞状真菌病毒”的真菌病毒聚集在一起,这似乎为在Kitrinoviricota门内创建一个新目提供了依据。这是关于感染新月弯孢菌的新型真菌病毒ClRV1完整基因组序列的首次报道。

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