• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过单细胞RNA测序结合转录组学揭示急性心肌梗死中与河马通路相关的生物标志物

Uncovering Hippo pathway-related biomarkers in acute myocardial infarction via scRNA-seq binding transcriptomics.

作者信息

Li Xingda, He Xueqi, Zhang Yu, Hao Xinyuan, Xiong Anqi, Huang Jiayu, Jiang Biying, Tong Zaiyu, Huang Haiyan, Yi Lian, Chen Wenjia

机构信息

National Key Laboratory of Frigid Zone Cardiovascular Diseases, Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education; International Cooperation Base for Major Cardiovascular Diseases in Cold Regions, China), College of Pharmacy, Harbin Medical University, Harbin, 150086, Heilongjiang, People's Republic of China.

Department of Pharmacy at the Second Affiliated Hospital, and Department of Pharmacology at College of Pharmacy (The Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin, 150086, People's Republic of China.

出版信息

Sci Rep. 2025 Mar 26;15(1):10368. doi: 10.1038/s41598-025-94820-6.

DOI:10.1038/s41598-025-94820-6
PMID:40133574
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11937457/
Abstract

This study investigated Hippo signaling pathway-related biomarkers in acute myocardial infarction (AMI). First, differentially expressed genes (DEGs) between AMI patients and controls were identified. Consensus clustering then classified AMI subtypes, followed by subtype-specific DEG screening. Candidate genes were derived from intersecting initial DEGs with subtype-associated DEGs. Three machine-learning algorithms prioritized five biomarkers (NAMPT, CXCL1, CREM, GIMAP6, and GIMAP7), validated through multi-dataset analyses and cellular expression profiling. qRT-PCR and Western blot confirmed differential expression patterns between AMI and controls across experimental models. Notably, NAMPT, CXCL1, and GIMAP6 exhibited cell-type-specific expression in endothelial cells and macrophages. We further predicted 179 potential therapeutic agents targeting these biomarkers. Niclosamide and eugenol were observed to mitigate hypoxia-induced injury in neonatal mouse ventricular cardiomyocytes. In vivo experiments demonstrated upregulated NAMPT/CXCL1 and downregulated GIMAP6/GIMAP7 in AMI myocardial tissues, with significant NAMPT protein elevation. These biomarkers show clinical diagnostic potential and provide mechanistic insights into AMI pathogenesis.

摘要

本研究调查了急性心肌梗死(AMI)中与河马信号通路相关的生物标志物。首先,确定了AMI患者与对照组之间的差异表达基因(DEG)。然后通过一致性聚类对AMI亚型进行分类,接着进行亚型特异性DEG筛选。候选基因来自初始DEG与亚型相关DEG的交集。三种机器学习算法对五个生物标志物(NAMPT、CXCL1、CREM、GIMAP6和GIMAP7)进行了优先级排序,并通过多数据集分析和细胞表达谱进行了验证。qRT-PCR和蛋白质印迹法证实了在不同实验模型中AMI与对照组之间的差异表达模式。值得注意的是,NAMPT、CXCL1和GIMAP6在内皮细胞和巨噬细胞中表现出细胞类型特异性表达。我们进一步预测了179种靶向这些生物标志物的潜在治疗药物。观察到氯硝柳胺和丁香酚可减轻新生小鼠心室心肌细胞的缺氧诱导损伤。体内实验表明,AMI心肌组织中NAMPT/CXCL1上调,GIMAP6/GIMAP7下调,NAMPT蛋白显著升高。这些生物标志物具有临床诊断潜力,并为AMI发病机制提供了机制性见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/cab94f247a2e/41598_2025_94820_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/ad2ceaf73f63/41598_2025_94820_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/a02202fa6e65/41598_2025_94820_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/3fbadcc3c960/41598_2025_94820_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/f2fac78e2a16/41598_2025_94820_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/0654a07c9f1f/41598_2025_94820_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/632b97ddb9ca/41598_2025_94820_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/acf3c70c6dac/41598_2025_94820_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/c294cbbbe4fa/41598_2025_94820_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/993a132a24fc/41598_2025_94820_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/cab94f247a2e/41598_2025_94820_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/ad2ceaf73f63/41598_2025_94820_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/a02202fa6e65/41598_2025_94820_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/3fbadcc3c960/41598_2025_94820_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/f2fac78e2a16/41598_2025_94820_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/0654a07c9f1f/41598_2025_94820_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/632b97ddb9ca/41598_2025_94820_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/acf3c70c6dac/41598_2025_94820_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/c294cbbbe4fa/41598_2025_94820_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/993a132a24fc/41598_2025_94820_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/883c/11937457/cab94f247a2e/41598_2025_94820_Fig10_HTML.jpg

相似文献

1
Uncovering Hippo pathway-related biomarkers in acute myocardial infarction via scRNA-seq binding transcriptomics.通过单细胞RNA测序结合转录组学揭示急性心肌梗死中与河马通路相关的生物标志物
Sci Rep. 2025 Mar 26;15(1):10368. doi: 10.1038/s41598-025-94820-6.
2
Identification of potential biomarkers associated with cuproptosis and immune microenvironment analysis in acute myocardial infarction: A diagnostic accuracy study.急性心肌梗死中与铜死亡相关的潜在生物标志物的鉴定及免疫微环境分析:一项诊断准确性研究
Medicine (Baltimore). 2025 Jan 31;104(5):e40817. doi: 10.1097/MD.0000000000040817.
3
Single-cell and bulk RNA sequencing-based screening and identification of extracellular trap network-related genes in neutrophils in acute myocardial infarction.基于单细胞和批量RNA测序的急性心肌梗死中性粒细胞中细胞外陷阱网络相关基因的筛选与鉴定
Medicine (Baltimore). 2024 Nov 22;103(47):e40590. doi: 10.1097/MD.0000000000040590.
4
Comprehensive analysis of macrophage-associated inflammatory genes in AMI based on bulk combined with single-cell sequencing data.基于 bulk 联合单细胞测序数据的 AMI 中巨噬细胞相关炎症基因的综合分析。
PeerJ. 2024 Sep 18;12:e17981. doi: 10.7717/peerj.17981. eCollection 2024.
5
A combined analysis of bulk RNA-seq and scRNA-seq was performed to investigate the molecular mechanisms associated with the occurrence of myocardial infarction.对 bulk RNA-seq 和 scRNA-seq 进行联合分析,以研究与心肌梗死发生相关的分子机制。
BMC Genomics. 2024 Oct 3;25(1):921. doi: 10.1186/s12864-024-10813-1.
6
Identification of a lactylation-related gene signature as the novel biomarkers for early diagnosis of acute myocardial infarction.鉴定一种与乳酰化相关的基因特征作为急性心肌梗死早期诊断的新型生物标志物。
Int J Biol Macromol. 2024 Dec;282(Pt 6):137431. doi: 10.1016/j.ijbiomac.2024.137431. Epub 2024 Nov 8.
7
Identification and validation of m7G-related genes related to macrophage immunity in acute myocardial infarction through comprehensive bioinformatics analysis.通过综合生物信息学分析鉴定和验证急性心肌梗死中与巨噬细胞免疫相关的m7G相关基因。
Biochem Biophys Res Commun. 2025 May 26;760:151684. doi: 10.1016/j.bbrc.2025.151684. Epub 2025 Mar 25.
8
Identification and analysis of key genes associated with acute myocardial infarction by integrated bioinformatics methods.基于整合生物信息学方法鉴定和分析与急性心肌梗死相关的关键基因。
Medicine (Baltimore). 2021 Apr 16;100(15):e25553. doi: 10.1097/MD.0000000000025553.
9
Identification of potential biomarkers and immune-related pathways related to immune infiltration in patients with acute myocardial infarction.鉴定与急性心肌梗死患者免疫浸润相关的潜在生物标志物和免疫相关途径。
Transpl Immunol. 2022 Oct;74:101652. doi: 10.1016/j.trim.2022.101652. Epub 2022 Jun 25.
10
Mst1/Hippo signaling pathway drives isoproterenol-induced inflammatory heart remodeling.Mst1/Hippo 信号通路驱动异丙肾上腺素诱导的炎症性心脏重构。
Int J Med Sci. 2024 Jul 1;21(9):1718-1729. doi: 10.7150/ijms.95850. eCollection 2024.

引用本文的文献

1
Integrated analysis of gene networks and cellular functions identifies novel heart failure biomarkers.基因网络与细胞功能的综合分析鉴定出新型心力衰竭生物标志物。
Hereditas. 2025 Aug 7;162(1):152. doi: 10.1186/s41065-025-00521-5.

本文引用的文献

1
YAP1 preserves tubular mitochondrial quality control to mitigate diabetic kidney disease.YAP1维持肾小管线粒体质量控制以减轻糖尿病肾病。
Redox Biol. 2024 Dec;78:103435. doi: 10.1016/j.redox.2024.103435. Epub 2024 Nov 23.
2
ACE Gene Mutations (rs577350502) in Early-Onset and Recurrent Myocardial Infarction: A Case Report and Review.早发性和复发性心肌梗死中的ACE基因突变(rs577350502):一例病例报告及文献复习
Pharmgenomics Pers Med. 2024 Apr 20;17:163-169. doi: 10.2147/PGPM.S455740. eCollection 2024.
3
Neutrophils are indispensable for adverse cardiac remodeling in heart failure.
中性粒细胞对于心力衰竭不良心脏重构是不可或缺的。
J Mol Cell Cardiol. 2024 Apr;189:1-11. doi: 10.1016/j.yjmcc.2024.02.005. Epub 2024 Feb 22.
4
Drug discovery targeting nicotinamide phosphoribosyltransferase (NAMPT): Updated progress and perspectives.靶向烟酰胺磷酸核糖转移酶(NAMPT)的药物发现:最新进展与展望。
Bioorg Med Chem. 2024 Feb 1;99:117595. doi: 10.1016/j.bmc.2024.117595. Epub 2024 Jan 11.
5
Regulatory mechanism of macrophage polarization based on Hippo pathway.基于 Hippo 通路的巨噬细胞极化调控机制。
Front Immunol. 2023 Nov 28;14:1279591. doi: 10.3389/fimmu.2023.1279591. eCollection 2023.
6
Comparison of percutaneous coronary intervention of native coronary artery versus bypass graft in patients with prior coronary artery bypass grafting.既往接受冠状动脉旁路移植术患者的自身冠状动脉经皮冠状动脉介入治疗与冠状动脉旁路移植术的比较。
J Thorac Dis. 2023 Oct 31;15(10):5371-5385. doi: 10.21037/jtd-23-473. Epub 2023 Sep 11.
7
Prognostic model development for classification of colorectal adenocarcinoma by using machine learning model based on feature selection technique boruta.基于特征选择技术 Boruta 的机器学习模型用于结直肠腺癌分类的预后模型开发。
Sci Rep. 2023 Apr 19;13(1):6413. doi: 10.1038/s41598-023-33327-4.
8
Comprehensive analysis of scRNA-Seq and bulk RNA-Seq reveals dynamic changes in the tumor immune microenvironment of bladder cancer and establishes a prognostic model.综合分析 scRNA-Seq 和 bulk RNA-Seq 揭示膀胱癌肿瘤免疫微环境的动态变化,并建立一个预后模型。
J Transl Med. 2023 Mar 27;21(1):223. doi: 10.1186/s12967-023-04056-z.
9
Decreased circulating microRNA-21 and microRNA-143 are associated to pulmonary hypertension.循环 microRNA-21 和 microRNA-143 的减少与肺动脉高压有关。
Turk J Med Sci. 2023 Feb;53(1):130-141. doi: 10.55730/1300-0144.5566. Epub 2023 Feb 22.
10
Interdependent Nuclear Co-Trafficking of ASPP1 and p53 Aggravates Cardiac Ischemia/Reperfusion Injury.ASPP1 和 p53 的相互依赖核共转运加剧了心脏缺血/再灌注损伤。
Circ Res. 2023 Jan 20;132(2):208-222. doi: 10.1161/CIRCRESAHA.122.321153. Epub 2022 Dec 30.