Lawson Lucinda P, Parameswaran Sreeja, Panganiban Ronald A, Constantine Gregory M, Weirauch Matthew T, Kottyan Leah C
Center for Autoimmune Genomics and Etiology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio; Division of Allergy and Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio.
J Allergy Clin Immunol. 2025 Jun;155(6):1738-1752. doi: 10.1016/j.jaci.2025.03.012. Epub 2025 Mar 24.
The field of genetic etiology of allergic diseases has advanced significantly in recent years. Shared risk loci reflect the contribution of genetic factors to the sequential development of allergic conditions across the atopic march, while unique risk loci provide opportunities to understand tissue specific manifestations of allergic disease. Most identified risk variants are noncoding, indicating that they likely influence gene expression through gene regulatory mechanisms. Despite recent advances, challenges persist, particularly regarding the need for increased ancestral diversity in research populations. Further, while polygenic risk scores show promise for identifying individuals at higher genetic risk for allergic diseases, their predictive accuracy varies across different ancestries and can be difficult to translate to an individual's absolute risk of developing a disease. Methodologies, including "nearest gene," 3D chromatin interaction analysis, expression quantitative trait locus analysis, experimental screens, and integrative bioinformatic models, have established connections between genetic variants and their regulatory targets, enhancing our understanding of disease risk and phenotypic variability. In this review, we focus on the state of knowledge of allergic sensitization and 5 allergic diseases: asthma, atopic dermatitis, allergic rhinitis, food allergy, and eosinophilic esophagitis. We summarize recent progress and highlight opportunities for advancing our understanding of their genetic etiology.
近年来,过敏性疾病的遗传病因学领域取得了显著进展。共享风险位点反映了遗传因素对特应性进程中过敏性疾病连续发展的影响,而独特的风险位点为理解过敏性疾病的组织特异性表现提供了机会。大多数已确定的风险变异是非编码的,这表明它们可能通过基因调控机制影响基因表达。尽管最近取得了进展,但挑战依然存在,特别是在研究人群中增加祖先多样性的必要性方面。此外,虽然多基因风险评分在识别过敏性疾病遗传风险较高的个体方面显示出前景,但其预测准确性在不同祖先之间存在差异,并且可能难以转化为个体患疾病的绝对风险。包括“最邻近基因”、三维染色质相互作用分析、表达定量性状位点分析、实验筛选和综合生物信息学模型在内的方法,已经建立了遗传变异与其调控靶点之间的联系,增进了我们对疾病风险和表型变异性的理解。在这篇综述中,我们关注过敏性致敏以及五种过敏性疾病的知识现状:哮喘、特应性皮炎、过敏性鼻炎、食物过敏和嗜酸性食管炎。我们总结了最近的进展,并强调了推进我们对其遗传病因学理解的机会。