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通过计算设计提高用于高效生产几丁质寡糖的几丁质酶的热稳定性

Thermostability Improvement of the Chitinase from for Efficient Chitin Oligosaccharide Production via Computational Design.

作者信息

Liu Jingwei, Xie Jie, Wang Si, Feng Hong, Wang Ganggang

机构信息

Key Laboratory of Environmental Microbiology of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.

Key Laboratory of Environmental and Applied Microbiology, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, China.

出版信息

Biomolecules. 2025 Feb 24;15(3):330. doi: 10.3390/biom15030330.

Abstract

The chitinase A1 from WL-12 (BcChiA1) exhibits promising potential for producing chitin oligosaccharides (CHOs), while its application is limited by its poor thermal stability. In this study, a set of thermostable variants were obtained by modifying BcChiA1 using a comprehensive strategy based on a computer-aided design. A combination of five beneficial single-point mutations (S67G/K177R/A220V/N257Y/N271E) to BcChiA1 generated a markedly improved variant, Mu5. Mu5 exhibited a half-life of 295 min at 60 °C, which was 59 times higher than that of BcChiA1. Furthermore, Mu5 was reused for chitin conversion, releasing 86.14 ± 3.73 mM of CHOs after five reaction cycles. Molecular dynamics simulation and structural analysis revealed that these enhancements were driven by increased structural rigidity and compactness, resulting in a protein conformation that was less prone to thermal denaturation. This combined approach through computational design yielded a thermostable BcChiA1 variant, potentially facilitating CHOs production in economical way.

摘要

来自WL-12的几丁质酶A1(BcChiA1)在生产几丁质寡糖(CHOs)方面显示出巨大潜力,但其应用受到热稳定性差的限制。在本研究中,基于计算机辅助设计的综合策略对BcChiA1进行修饰,获得了一组热稳定变体。对BcChiA1进行五个有益单点突变(S67G/K177R/A220V/N257Y/N271E)的组合产生了一个显著改进的变体Mu5。Mu5在60℃下的半衰期为295分钟,比BcChiA1高59倍。此外,Mu5可重复用于几丁质转化,经过五个反应循环后释放出86.14±3.73 mM的CHOs。分子动力学模拟和结构分析表明,这些增强是由结构刚性和紧凑性增加驱动的,导致蛋白质构象更不易发生热变性。这种通过计算设计的组合方法产生了一种热稳定的BcChiA1变体,有可能以经济的方式促进CHOs的生产。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab6e/11940100/2749be12a71e/biomolecules-15-00330-g001.jpg

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