Vietmeier Anna, Valkanas Michelle, Lamagna Natalie, Flett Samuel, Gulliver Djuna, Trun Nancy
Department of Biological Sciences, Duquesne University, Pittsburgh, Pennsylvania, USA.
Department of Energy, National Energy Technology Laboratory, Pittsburgh, Pennsylvania, USA.
Appl Environ Microbiol. 2025 May 21;91(5):e0040525. doi: 10.1128/aem.00405-25. Epub 2025 Apr 16.
Passive remediation systems (PRSs) treating either acidic or neutral abandoned coal mine drainage (AMD) are colonized by bacteria that can bioremediate iron (Fe) through chemical cycling. Due to the low pH in acidic AMD, iron oxidation from soluble Fe(II) to precipitated Fe(III) is mainly directed by microbial oxidation. Less well described are biotic reactions that lead to iron remediation through abiotic secondary reactions. We describe here iron oxidation in acidic AMD that is mediated by the bacterial reduction of nitrate to nitrite followed by the geochemical oxidation of Fe(II). Within an acidic PRS, 4,560 bacteria cultured from the microbial community were screened for their ability to oxidize iron and to perform nitrate-dependent iron oxidation (NDFO). Iron oxidation in the culturable community was observed in every pond of the system, ranging from 2.1% to 11.4%, and NDFO was observed in every pond, ranging from 1.4% to 6.0% of the culturable bacteria. Five NDFO isolates were purified and identified as spp. One of our isolates, sp. AV18 was shown to drive NDFO through the bacterial production of nitrite that in turn chemically oxidizes Fe(II) (nitrate reduction-iron oxidation; NRIO). AV18 expressed nitrate reductase, , concurrent to nitrite production. Burkholderiales are found by 16S rRNA gene sequencing in every pond of the PRS. The frequency of NDFO metabolism in the culturable microbial community and abundance of Burkholderiales in the PRS suggest nitrite producers contribute to the bioremediation of iron in acidic AMD and may be an unharnessed opportunity to increase iron bioremediation in acidic conditions.
Our study sheds light on a poorly defined biogeochemical interaction, nitrate-dependent iron oxidation (NDFO), that has been described in several environments. We show that bacterial nitrate reduction produces nitrite, which can chemically oxidize ferrous iron, leading to insoluble ferric iron. We show that bacteria capable of the nitrate reduction-iron oxidation (NRIO) reactions are prevalent throughout multiple passive remediation systems that treat acidic coal mine drainage, indicating this may be a widespread mechanism for iron removal under acidic conditions. In acidic coal mine remediation, iron precipitation has been shown to be solely bacterially mediated, and NRIO provides a simple mechanism for aerobic oxidation of iron in these conditions.
处理酸性或中性废弃煤矿排水(AMD)的被动修复系统(PRSs)中,定殖着一些能够通过化学循环对铁(Fe)进行生物修复的细菌。由于酸性AMD的pH值较低,可溶性Fe(II)氧化为沉淀态Fe(III)主要是由微生物氧化作用主导的。而通过非生物二级反应实现铁修复的生物反应则较少被描述。我们在此描述了酸性AMD中的铁氧化过程,该过程由细菌将硝酸盐还原为亚硝酸盐,随后Fe(II)发生地球化学氧化所介导。在一个酸性PRS中,从微生物群落中培养出的4560株细菌被筛选其氧化铁以及进行硝酸盐依赖型铁氧化(NDFO)的能力。在该系统的每个池塘中均观察到了可培养群落中的铁氧化现象,其范围为2.1%至11.4%,并且在每个池塘中都观察到了NDFO现象,占可培养细菌的1.4%至6.0%。对五株NDFO分离株进行了纯化并鉴定为 spp.。我们的一株分离株, sp. AV18被证明通过细菌产生亚硝酸盐来驱动NDFO,而亚硝酸盐进而化学氧化Fe(II)(硝酸盐还原 - 铁氧化;NRIO)。AV18在产生亚硝酸盐的同时表达硝酸盐还原酶 。通过16S rRNA基因测序发现在PRS的每个池塘中都存在伯克霍尔德氏菌目。可培养微生物群落中NDFO代谢的频率以及PRS中伯克霍尔德氏菌目的丰度表明,亚硝酸盐产生菌有助于酸性AMD中铁的生物修复,并且可能是在酸性条件下增加铁生物修复的一个未被利用的机会。
我们的研究揭示了一种定义尚不明确的生物地球化学相互作用,即硝酸盐依赖型铁氧化(NDFO),这种现象已在多种环境中被描述。我们表明细菌硝酸盐还原产生亚硝酸盐,亚硝酸盐可以化学氧化亚铁,从而生成不溶性三价铁。我们表明能够进行硝酸盐还原 - 铁氧化(NRIO)反应的细菌在多个处理酸性煤矿排水的被动修复系统中普遍存在,这表明这可能是酸性条件下铁去除的一种广泛机制。在酸性煤矿修复中,铁沉淀已被证明完全由细菌介导,而NRIO为这些条件下铁的需氧氧化提供了一种简单机制。