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脊髓损伤中双硫死亡相关基因的差异表达及其在免疫微环境中的作用

Differential Expression of Disulfidptosis-Related Genes in Spinal Cord Injury and Their Role in the Immune Microenvironment.

作者信息

Lu Feng, Mai Zifeng, Zhang Longfei, Luo Hao, Wang Lifeng, Li Shihong, Zhong Maolin

机构信息

Department of Anesthesiology, The First Affiliated Hospital of Gannan Medical University, No. 128 Jinling Road, Ganzhou, Jiangxi, China.

Key Laboratory of Prevention and Treatment of Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Gannan Medical University, Ganzhou, Jiangxi, China.

出版信息

Mol Neurobiol. 2025 Apr 16. doi: 10.1007/s12035-025-04931-4.

DOI:10.1007/s12035-025-04931-4
PMID:40237950
Abstract

Spinal cord injury (SCI) often results in severe sensory, motor, and autonomic dysfunction, with limited treatment options due to complex underlying mechanisms. Disulfidptosis, a recently discovered form of cell death driven by disulfide bond accumulation, has been linked to various diseases, but its role in SCI remains unexplored. This study investigates the involvement of disulfidptosis-related genes (DRGs) in SCI to identify potential diagnostic markers and therapeutic targets. Using SCI datasets from the Gene Expression Omnibus (GEO), we conducted differential gene expression analysis, identifying key disulfidptosis-related differentially expressed genes (DRDEGs). Further analysis through gene set enrichment (GSEA) and Bayesian pathway enrichment highlighted significant involvement in pathways such as NF-κB, PI3K/Akt, and MAPK, with an emphasis on nephrin family interactions. Three core DRDEGs-HK2, Map3k8, and S100a6-were identified, and a diagnostic model built on these genes demonstrated strong predictive performance (AUC: 0.896 in training, 0.850 in validation). Additionally, real-time PCR (qRT-PCR) in an animal model validated the elevated expression of these DRDEGs in SCI samples. This research provides novel insights into disulfidptosis in SCI, suggesting these genes as promising targets for improved diagnostic and therapeutic strategies.

摘要

脊髓损伤(SCI)常导致严重的感觉、运动和自主神经功能障碍,由于其潜在机制复杂,治疗选择有限。二硫键堆积驱动的细胞死亡形式——二硫化物诱导细胞焦亡(Disulfidptosis),已被证实与多种疾病相关,但其在脊髓损伤中的作用尚不清楚。本研究旨在探讨二硫化物诱导细胞焦亡相关基因(DRGs)在脊髓损伤中的作用,以确定潜在的诊断标志物和治疗靶点。利用基因表达综合数据库(GEO)中的脊髓损伤数据集,我们进行了差异基因表达分析,确定了关键的二硫化物诱导细胞焦亡相关差异表达基因(DRDEGs)。通过基因集富集分析(GSEA)和贝叶斯通路富集分析进一步发现,这些基因显著参与了NF-κB、PI3K/Akt和MAPK等信号通路,尤其在nephrin家族相互作用中起重要作用。我们确定了三个核心DRDEGs——HK2、Map3k8和S100a6,并基于这些基因构建的诊断模型显示出强大的预测性能(训练集AUC:0.896,验证集AUC:0.850)。此外,动物模型中的实时荧光定量PCR(qRT-PCR)验证了这些DRDEGs在脊髓损伤样本中的表达上调。本研究为脊髓损伤中的二硫化物诱导细胞焦亡提供了新的见解,表明这些基因有望成为改善诊断和治疗策略的靶点。

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本文引用的文献

1
Bioinformatics analysis of genes associated with disulfidptosis in spinal cord injury.脊髓损伤中与二硫键介导的细胞程序性坏死相关基因的生物信息学分析
PLoS One. 2025 Feb 14;20(2):e0318016. doi: 10.1371/journal.pone.0318016. eCollection 2025.
2
Commentary: Feasibility, Clinical Potential, and Limitations of Trans-Burr Hole Ultrasound for Postoperative Evaluation of Chronic Subdural Hematoma: A Prospective Pilot Study.评论:经钻孔超声对慢性硬膜下血肿术后评估的可行性、临床潜力及局限性:一项前瞻性初步研究
Neurosurgery. 2024 Oct 1;95(4):e119-e120. doi: 10.1227/neu.0000000000002997. Epub 2024 May 15.
3
Exploring the Relevance of Disulfidptosis to the Pathophysiology of Ulcerative Colitis by Bioinformatics Analysis.
通过生物信息学分析探索二硫化物诱导细胞程序性坏死与溃疡性结肠炎病理生理学的相关性
J Inflamm Res. 2024 May 7;17:2757-2774. doi: 10.2147/JIR.S454668. eCollection 2024.
4
Identification of disulfidptosis-related genes and subgroups in Alzheimer's disease.阿尔茨海默病中与二硫化物诱导性细胞死亡相关基因及亚组的鉴定
Front Aging Neurosci. 2023 Aug 4;15:1236490. doi: 10.3389/fnagi.2023.1236490. eCollection 2023.
5
HK2: Gatekeeping microglial activity by tuning glucose metabolism and mitochondrial functions.HK2:通过调节葡萄糖代谢和线粒体功能来控制小胶质细胞的活性。
Mol Cell. 2023 Mar 16;83(6):829-831. doi: 10.1016/j.molcel.2023.02.022.
6
Deadly actin collapse by disulfidptosis.二硫键介导的细胞焦亡导致致命的肌动蛋白塌陷
Nat Cell Biol. 2023 Mar;25(3):375-376. doi: 10.1038/s41556-023-01100-4.
7
Identification and validation of immune and oxidative stress-related diagnostic markers for diabetic nephropathy by WGCNA and machine learning.通过 WGCNA 和机器学习鉴定和验证糖尿病肾病的免疫和氧化应激相关诊断标志物。
Front Immunol. 2023 Feb 22;14:1084531. doi: 10.3389/fimmu.2023.1084531. eCollection 2023.
8
Actin cytoskeleton vulnerability to disulfide stress mediates disulfidptosis.细胞骨架对二硫键压力的脆弱性介导了二硫键细胞凋亡。
Nat Cell Biol. 2023 Mar;25(3):404-414. doi: 10.1038/s41556-023-01091-2. Epub 2023 Feb 6.
9
The cancer-associated fibroblast-related signature predicts prognosis and indicates immune microenvironment infiltration in gastric cancer.癌症相关成纤维细胞相关特征可预测胃癌的预后,并提示免疫微环境浸润。
Front Immunol. 2022 Jul 29;13:951214. doi: 10.3389/fimmu.2022.951214. eCollection 2022.
10
The PI3K/AKT signalling pathway in inflammation, cell death and glial scar formation after traumatic spinal cord injury: Mechanisms and therapeutic opportunities.创伤性脊髓损伤后炎症、细胞死亡和神经胶质瘢痕形成中的 PI3K/AKT 信号通路:机制和治疗机会。
Cell Prolif. 2022 Sep;55(9):e13275. doi: 10.1111/cpr.13275. Epub 2022 Jun 26.