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花生(Arachis hypogaea L.)中AhCOLs家族的全基因组分析及表达谱

Genome-Wide Analysis and Expression Profiles of AhCOLs Family in Peanut ( L.).

作者信息

Wang Wei, Liu Xiaoyu, Liu Che, Liu Xiaoqin

机构信息

Peking University Institute of Advanced Agricultural Sciences, Shandong Laboratory of Advanced Agriculture Sciences at Weifang, Weifang 261325, China.

College of Life Sciences, Shandong Agricultural University, Taian 271018, China.

出版信息

Int J Mol Sci. 2025 Apr 5;26(7):3404. doi: 10.3390/ijms26073404.

Abstract

The CONSTANS-like (COL) gene family plays critical roles in plant growth, development, stress responses, and light signal transduction. However, its functions in peanut (Arachis hypogaea) remain poorly understood. In this study, we identified 18 AhCOL genes in the peanut genome, all localized in the nucleus. Phylogenetic analysis classified these genes into three subfamilies, with Group I containing eight members and Groups II and III each comprising five. Conserved domain analysis revealed that all AhCOL proteins possess at least one B-box and one CCT domain. Most of the AhCOL members in peanuts contain a large number of ABA and MeJA elements. Additionally, some members have low-temperature response elements, anaerobic induction, circadian control, and defense stress elements. Expression profiling indicated that most genes are abundantly expressed in leaves, flowers, and fruit needles. Notably, genes such as , , , and were upregulated under light induction and mechanical stress, highlighting their involvement in pod development. AhCOL1 interacts with AhNF-YC1, while AhCOL3 interacts with both AhNF-YC1 and AhCOP1 proteins. This study identifies key AhCOL genes implicated in light and mechanical stress responses, offering insights into their potential roles in peanut flowering and abiotic stress tolerance.

摘要

CONSTANS类(COL)基因家族在植物生长、发育、应激反应和光信号转导中发挥着关键作用。然而,其在花生(Arachis hypogaea)中的功能仍知之甚少。在本研究中,我们在花生基因组中鉴定出18个AhCOL基因,它们均定位于细胞核中。系统发育分析将这些基因分为三个亚家族,其中第一组包含8个成员,第二组和第三组各包含5个成员。保守结构域分析表明,所有AhCOL蛋白均至少拥有一个B-box和一个CCT结构域。花生中的大多数AhCOL成员含有大量脱落酸(ABA)和茉莉酸甲酯(MeJA)元件。此外,一些成员具有低温响应元件、厌氧诱导、昼夜节律控制和防御应激元件。表达谱分析表明,大多数基因在叶、花和果针中大量表达。值得注意的是,诸如 、 、 和 等基因在光诱导和机械胁迫下上调,突出了它们在荚果发育中的作用。AhCOL1与AhNF-YC1相互作用,而AhCOL3与AhNF-YC1和AhCOP1蛋白均相互作用。本研究鉴定出了与光和机械应激反应相关的关键AhCOL基因,为它们在花生开花和非生物胁迫耐受性中的潜在作用提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2346/11989928/460a39b34322/ijms-26-03404-g001.jpg

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