Li Shipeng, Fu Huiwen, Sharif Yasir, Abdullaziz Sheidu, Wang Lihui, Zhang Yongli, Zhuang Yuhui
Centre for Legume Plant Genetics and System Biology, School of Future Technology and Haixia Institute of Science and Technology, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Int J Mol Sci. 2024 Dec 13;25(24):13361. doi: 10.3390/ijms252413361.
Subtilases (SBTs), known as serine proteases or phytoproteases in plants, are crucial enzymes involved in plant development, growth, and signaling pathways. Despite their recognized importance in other plant species, information regarding their functional roles in cultivated peanut ( L.) remains sparse. We identified 122 genes in the STQ peanut genome, classifying them into six subgroups based on phylogenetic analysis. Detailed structural and motif analyses revealed the presence of conserved domains, highlighting the evolutionary conservation of . The collinearity results indicate that the gene family has 17, 5, and 1 homologous gene pairs with , , and , respectively. Furthermore, the prediction of -elements in promoters indicates that they are mainly associated with hormones and abiotic stress. GO and KEGG analyses showed that many are important in stress response. Based on transcriptome datasets, some genes, such as , , , , , and , showed remarkably higher expression in diverse tissues/organs, i.e., embryo, root, and leaf, potentially implicating them in seed development. Likewise, only a few genes, including , , , , and , were upregulated under abiotic stress (drought and cold) and phytohormone (ethylene, abscisic acid, paclobutrazol, brassinolide, and salicylic acid) treatments. Upon inoculation with , the expression levels of , , , and were upregulated in disease-resistant and downregulated in disease-susceptible varieties. qRT-PCR-based expression profiling presented the parallel expression trends as generated from transcriptome datasets. The comprehensive dataset generated in the study provides valuable insights into understanding the functional roles of , paving the way for potential applications in crop improvement. These findings deepen our understanding of peanut molecular biology and offer new strategies for enhancing stress tolerance and other agronomically important traits.
枯草杆菌蛋白酶(SBTs)在植物中被称为丝氨酸蛋白酶或植物蛋白酶,是参与植物发育、生长和信号通路的关键酶。尽管它们在其他植物物种中的重要性已得到认可,但关于它们在栽培花生(Arachis hypogaea L.)中的功能作用的信息仍然稀少。我们在花生基因组中鉴定出122个SBT基因,根据系统发育分析将它们分为六个亚组。详细的结构和基序分析揭示了保守结构域的存在,突出了SBT的进化保守性。共线性结果表明,SBT基因家族分别与拟南芥、大豆和鹰嘴豆有17、5和1对同源基因对。此外,启动子中顺式作用元件的预测表明它们主要与激素和非生物胁迫相关。基因本体(GO)和京都基因与基因组百科全书(KEGG)分析表明,许多SBT在胁迫响应中很重要。基于转录组数据集,一些基因,如AhSBT1.1、AhSBT1.2、AhSBT2.1、AhSBT3.1、AhSBT5.1和AhSBT5.2,在不同组织/器官(即胚、根和叶)中表现出显著更高的表达,可能暗示它们参与种子发育。同样,在非生物胁迫(干旱和寒冷)和植物激素(乙烯、脱落酸、多效唑、油菜素内酯和水杨酸)处理下,只有少数基因,包括AhSBT2.3、AhSBT3.2、AhSBT4.1、AhSBT5.3和AhSBT6.1,被上调。接种青枯菌后,抗病品种中AhSBT1.1、AhSBT1.2、AhSBT2.1和AhSBT3.1的表达水平上调,感病品种中下调。基于实时荧光定量PCR(qRT-PCR)的表达谱呈现出与转录组数据集产生的平行表达趋势。本研究中生成的综合数据集为理解SBT的功能作用提供了有价值的见解,为作物改良中的潜在应用铺平了道路。这些发现加深了我们对花生分子生物学的理解,并为提高胁迫耐受性和其他农艺重要性状提供了新策略。