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An integrated transcriptomic cell atlas of human neural organoids.人类神经类器官的综合转录组细胞图谱。
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Individual variation in the emergence of anterior-to-posterior neural fates from human pluripotent stem cells.人类多能干细胞中从前向后神经命运出现的个体差异。
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Chromatin accessibility during human first-trimester neurodevelopment.人类孕早期神经发育过程中的染色质可及性。
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A patterned human neural tube model using microfluidic gradients.使用微流控梯度的模式化人类神经管模型。
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Comprehensive cell atlas of the first-trimester developing human brain.人类大脑第一孕期发育的全面细胞图谱。
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Interindividual variation in human cortical cell type abundance and expression.人类皮质细胞类型丰度和表达的个体间变异性。
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Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis.在大脑器官样体中模拟特发性自闭症揭示了早期神经发生过程中兴奋性皮质神经元亚型的失衡。
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Clonally Selected Lines After CRISPR-Cas Editing Are Not Isogenic.经 CRISPR-Cas 编辑后的克隆选择系并非同基因系。
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10
Gradient to sectioning CUBE workflow for the generation and imaging of organoids with localized differentiation.梯度到分区 CUBE 工作流程,用于具有局部分化的类器官的生成和成像。
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类器官中具有WNT和SHH正交梯度的人脑区域的特异性揭示了不同细胞系之间的模式差异。

Specification of human brain regions with orthogonal gradients of WNT and SHH in organoids reveals patterning variations across cell lines.

作者信息

Scuderi Soraya, Kang Tae-Yun, Jourdon Alexandre, Nelson Alex, Yang Liang, Wu Feinan, Anderson George M, Mariani Jessica, Tomasini Livia, Sarangi Vivekananda, Abyzov Alexej, Levchenko Andre, Vaccarino Flora M

机构信息

Program in Neurodevelopment and Regeneration, Yale University, New Haven, CT 06520, USA; Child Study Center, Yale University, New Haven, CT 06520, USA.

Program in Neurodevelopment and Regeneration, Yale University, New Haven, CT 06520, USA; Systems Biology Institute, Yale University, West Haven, CT 06516, USA; Department of Biomedical Engineering, Yale University, New Haven, CT 06520, USA.

出版信息

Cell Stem Cell. 2025 Jun 5;32(6):970-989.e11. doi: 10.1016/j.stem.2025.04.006. Epub 2025 May 1.

DOI:10.1016/j.stem.2025.04.006
PMID:40315847
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12145255/
Abstract

The repertoire of neurons and their progenitors depends on their location along the antero-posterior and dorso-ventral axes of the neural tube. To model these axes, we designed the Dual Orthogonal-Morphogen Assisted Patterning System (Duo-MAPS) diffusion device to expose spheres of induced pluripotent stem cells (iPSCs) to concomitant orthogonal gradients of a posteriorizing and a ventralizing morphogen, activating WNT and SHH signaling, respectively. Comparison with single-cell transcriptomes from the fetal human brain revealed that Duo-MAPS-patterned organoids generated an extensive diversity of neuronal lineages from the forebrain, midbrain, and hindbrain. WNT and SHH crosstalk translated into early patterns of gene expression programs associated with the generation of specific brain lineages with distinct functional networks. Human iPSC lines showed substantial interindividual and line-to-line variations in their response to morphogens, highlighting that genetic and epigenetic variations may influence regional specification. Morphogen gradients promise to be a key approach to model the brain in its entirety.

摘要

神经元及其祖细胞的谱系取决于它们在神经管前后轴和背腹轴上的位置。为了模拟这些轴,我们设计了双正交形态发生素辅助模式系统(Duo-MAPS)扩散装置,以使诱导多能干细胞(iPSC)球暴露于分别激活WNT和SHH信号传导的后化和腹化形态发生素的伴随正交梯度中。与来自胎儿人类大脑的单细胞转录组进行比较发现,Duo-MAPS模式化的类器官产生了来自前脑、中脑和后脑的广泛多样的神经元谱系。WNT和SHH信号的相互作用转化为与具有不同功能网络的特定脑谱系生成相关的早期基因表达程序模式。人类iPSC系在对形态发生素的反应中表现出显著的个体间和系间差异,这突出表明遗传和表观遗传变异可能影响区域特化。形态发生素梯度有望成为一种整体模拟大脑的关键方法。