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一项关于先天性深度失明患者静息态功能连接性研究的可重复性

Replicability of a resting-state functional connectivity study in profound early blindness.

作者信息

Nadvar Negin, Bauer Corinna, Pamir Zahide, Merabet Lotfi B, Koppelmans Vincent, Weiland James

机构信息

Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, United States.

Laboratory of Neuroimaging and Vision Science, Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States.

出版信息

Front Syst Neurosci. 2025 Apr 28;19:1547276. doi: 10.3389/fnsys.2025.1547276. eCollection 2025.

Abstract

It has been shown that the choice of preprocessing pipelines to remove contamination from functional magnetic resonance images can significantly impact the results, particularly in resting-state functional connectivity (rsFC) studies. This underscores the critical importance of replication studies with different preprocessing methodologies. In this study, we attempted to reproduce the rsFC results presented in an original study by Bauer et al. in 2017 on a group of sighted control (SC) and early blind (EB) subjects. By using the original dataset, we utilized another widely used software package to investigate how applying different implementations of the original pipeline (RMin model) or a more rigorous and extensive preprocessing stream (RExt model) can alter the whole-brain rsFC results. Our replication study was not able to fully reproduce the findings of the original paper. Overall, RExt shifted the distribution of rsFC values and reduced functional network density more drastically compared with RMin and the original pipeline. Remarkably, the largest rsFC effects appeared to primarily belong to certain connection pairs, irrespective of the pipeline used, likely demonstrating immunity of the larger effects and the true results against suboptimal processing. This may highlight the significance of results verification across different computational streams in pursuit of the true findings.

摘要

研究表明,用于去除功能磁共振成像中噪声的预处理流程选择会显著影响结果,尤其是在静息态功能连接(rsFC)研究中。这凸显了采用不同预处理方法进行重复研究的至关重要性。在本研究中,我们试图在一组视力正常的对照组(SC)和早期失明组(EB)受试者中重现Bauer等人在2017年一项原始研究中呈现的rsFC结果。通过使用原始数据集,我们利用另一个广泛使用的软件包来研究应用原始流程(RMin模型)的不同实现方式或更严格、更广泛的预处理流程(RExt模型)如何改变全脑rsFC结果。我们的重复研究未能完全重现原始论文的研究结果。总体而言,与RMin和原始流程相比,RExt更显著地改变了rsFC值的分布并降低了功能网络密度。值得注意的是,无论使用何种流程,最大的rsFC效应似乎主要属于某些连接对,这可能表明较大效应和真实结果对次优处理具有抗性。这可能突出了在追求真实结果时跨不同计算流程进行结果验证的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d57/12066490/f4e73067d335/fnsys-19-1547276-g001.jpg

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