Zhang Shengjie, Zhou Kangqi, Pan Xianhui, Lin Yong, Peng Jinxia, Qin Junqi, Ke Zhenlin, Han Yaoquan, Chen Zhong, Du Xuesong, Li Wenhong, Wei Pinyuan, Wang Dapeng
Guangxi Key Laboratory of Aquaculture Genetics and Breeding, Guangxi Academy of Fishery Sciences, Nanning 530021, China.
College of Animal Science and Technology, Guangxi University, Nanning 530003, China.
Animals (Basel). 2025 Apr 30;15(9):1284. doi: 10.3390/ani15091284.
is an economically important mollusk in China, but detailed insights into its mitochondrial genome remain scarce. In this study, we sequenced and comprehensively analyzed the structural features and selection pressures of the mitochondrial genome. The maximum likelihood method and Bayesian phylogenetic inference method were used to construct a phylogenetic tree of with 21 other species, including gastropods and bivalves. The full-length mitochondrial genome of 17,379 bp was found to include 22 transfer RNA genes, 2 ribosomal RNA genes, and 13 protein-coding genes, exhibiting similarity to the composition and arrangement of mitochondrial genes in other gastropod species. Notably, the Ka/Ks ratios of mitochondrial protein-coding genes (, , , , , , , , , , , , and ) were <1, which indicates that the snail genes of the three genera of the family may have been subjected to strong natural selection pressure during the evolutionary process, so that the number of synonymous mutations (ks) in genes was much more than that of nonsynonymous mutations (ka). Comparative genomic analysis indicated that, apart from the absence of and , the gene composition of shares a high degree of homology with other members of the conical snail family. Phylogenetic analysis demonstrated that the selected species could be classified into two primary clades in which clustered with the Viviparidae family. This study bridges the knowledge gap regarding the mitochondrial genome of and offers valuable insights into the systematic relationships within the Viviparidae family.
是中国一种具有重要经济价值的软体动物,但对其线粒体基因组的详细了解仍然匮乏。在本研究中,我们对其线粒体基因组的结构特征和选择压力进行了测序和全面分析。采用最大似然法和贝叶斯系统发育推断法构建了包括腹足纲和双壳纲在内的21个其他物种的系统发育树。发现17379 bp的线粒体基因组全长包含22个转移RNA基因、2个核糖体RNA基因和13个蛋白质编码基因,与其他腹足纲物种的线粒体基因组成和排列相似。值得注意的是,线粒体蛋白质编码基因(,,,,,,,,,,,,和)的Ka/Ks比值<1,这表明该科三个属的蜗牛基因在进化过程中可能受到了强烈的自然选择压力,使得基因中的同义突变(ks)数量远多于非同义突变(ka)。比较基因组分析表明,除了没有和外,的基因组成与锥形蜗牛科的其他成员具有高度同源性。系统发育分析表明,所选物种可分为两个主要分支,其中与胎生螺科聚集在一起。本研究填补了关于线粒体基因组的知识空白,并为胎生螺科内部的系统关系提供了有价值的见解。