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通过多种工程策略提高QQ-12菌株中阿卡波糖的产量

Enhancement of Acarbose Production in sp. QQ-12 via Multiple Engineering Strategies.

作者信息

Liu Guoqiang, Liu Qi, Song Xiaotong, Jiao Xingzhi, Zhou Wanping, Kang Qianjin, Bai Linquan

机构信息

State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.

College of Life Science, Tarim University, Alar 843300, China.

出版信息

J Agric Food Chem. 2025 May 28;73(21):12845-12855. doi: 10.1021/acs.jafc.5c00613. Epub 2025 May 14.

DOI:10.1021/acs.jafc.5c00613
PMID:40367441
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12123602/
Abstract

The α-glucosidase inhibitor acarbose is used in the treatment of type 2 diabetes mellitus. Metabolic engineering is crucial to overcome acarbose production bottlenecks. Herein, a genetic toolkit was developed to enable metabolic engineering in sp.. The attachment/integration (Att/Int) systems of ΦBT1, pSAM2, R4, and TG1 showed conjugation frequencies of 0.98-24.4%. Furthermore, three mutants were constructed by deleting nontarget biosynthetic gene clusters (BGCs) and inserting one to three additional copies of the acarbose biosynthetic gene cluster (). These mutants, with 2, 3, and 4 copies of gene cluster, demonstrated titer increases of 69.4%, 99.3%, and 24.2%, respectively, with a sharply declined titer in the four-copy strain LGQ-17::3. To rescue the acarbose titer in LGQ-17::3, we overexpressed rate-limiting genes , , , , , , or . The overexpression of and resulted in acarbose titer increases of 1.04-fold and 98%, respectively. Furthermore, following fed-batch fermentation optimization in shake flasks, the titer of acarbose in LGQ-17::3::- increased by 1.1-fold to reach 8.12 g/L. This genetic engineering toolkit with multiple Att/Int systems and high conjugation frequencies paves the way for future genetic engineering in sp., and the engineered strain shows excellent potential for industrial application.

摘要

α-葡萄糖苷酶抑制剂阿卡波糖用于治疗2型糖尿病。代谢工程对于克服阿卡波糖生产瓶颈至关重要。在此,开发了一种遗传工具包以实现对[具体菌种名称缺失]的代谢工程改造。ΦBT1、pSAM2、R4和TG1的附着/整合(Att/Int)系统显示出0.98 - 24.4%的接合频率。此外,通过删除非目标生物合成基因簇(BGCs)并插入一到三个额外拷贝的阿卡波糖生物合成基因簇构建了三个突变体。这些分别具有2、3和4个基因簇拷贝的突变体,其产量分别提高了69.4%、99.3%和24.2%,而四拷贝基因簇菌株LGQ - 17::3的产量急剧下降。为挽救LGQ - 17::3中的阿卡波糖产量,我们过表达了限速基因[具体基因名称缺失]。[具体基因名称缺失]和[具体基因名称缺失]的过表达分别使阿卡波糖产量提高了1.04倍和98%。此外,在摇瓶中进行补料分批发酵优化后,LGQ - 17::3::-中的阿卡波糖产量提高了1.1倍,达到8.12 g/L。这种具有多个Att/Int系统和高接合频率的基因工程工具包为未来对[具体菌种名称缺失]的基因工程改造铺平了道路,并且工程菌株显示出优异的工业应用潜力。

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本文引用的文献

1
Identification and characterization of a strong constitutive promoter stnYp for activating biosynthetic genes and producing natural products in streptomyces.鉴定和表征链霉菌中一种强组成型启动子 stnYp,用于激活生物合成基因和产生天然产物。
Microb Cell Fact. 2023 Jul 13;22(1):127. doi: 10.1186/s12934-023-02136-9.
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Dissection of 3D chromosome organization in A3(2) leads to biosynthetic gene cluster overexpression.A3(2) 中三维染色体组织的剖析导致生物合成基因簇的过度表达。
Proc Natl Acad Sci U S A. 2023 Mar 14;120(11):e2222045120. doi: 10.1073/pnas.2222045120. Epub 2023 Mar 6.
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Acarbose May Function as a Competitive Exclusion Agent for the Producing Bacteria.
阿卡波糖可能作为产酶菌的竞争性排除剂发挥作用。
ACS Chem Biol. 2023 Feb 17;18(2):367-376. doi: 10.1021/acschembio.2c00795. Epub 2023 Jan 17.
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Enhancement of acarbose production by genetic engineering and fed-batch fermentation strategy in Actinoplanes sp. SIPI12-34.在游动放线菌 SIPI12-34 中通过遗传工程和补料分批发酵策略提高阿卡波糖的产量。
Microb Cell Fact. 2022 Nov 23;21(1):240. doi: 10.1186/s12934-022-01969-0.
5
A mini-review: environmental and metabolic factors affecting aminoglycoside efficacy.一篇迷你综述:影响氨基糖苷类药物疗效的环境和代谢因素。
World J Microbiol Biotechnol. 2022 Nov 9;39(1):7. doi: 10.1007/s11274-022-03445-8.
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Biochemical Characterization of GacI, a Bifunctional Glycosyltransferase-Phosphatase Enzyme Involved in Acarbose Biosynthesis in GLA.O.参与 GLA.O. 阿卡波糖生物合成的双功能糖基转移酶-磷酸酶 GacI 的生化特性研究
Biochemistry. 2022 Nov 15;61(22):2628-2635. doi: 10.1021/acs.biochem.2c00473. Epub 2022 Oct 26.
7
Complete biosynthetic pathway to the antidiabetic drug acarbose.阿波糖这种抗糖尿病药物的全生物合成途径。
Nat Commun. 2022 Jun 15;13(1):3455. doi: 10.1038/s41467-022-31232-4.
8
antiSMASH 6.0: improving cluster detection and comparison capabilities.antiSMASH 6.0:提高簇检测和比较能力。
Nucleic Acids Res. 2021 Jul 2;49(W1):W29-W35. doi: 10.1093/nar/gkab335.
9
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.阿卡波糖生物合成基因簇在游动放线菌 SE50/110 中的表达依赖于生长阶段。
BMC Genomics. 2020 Nov 23;21(1):818. doi: 10.1186/s12864-020-07194-6.
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A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110.在游动放线菌SE50/110中,一个受麦芽糖调控的大基因组区域被转录调节因子MalT激活。
Appl Microbiol Biotechnol. 2020 Nov;104(21):9283-9294. doi: 10.1007/s00253-020-10923-2. Epub 2020 Sep 28.