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利用内转录间隔区测序对波多黎各洞穴中的真菌群落进行表征。

Characterization of fungal communities in Puerto Rican caves using internal transcribed spacer sequencing.

作者信息

Nieves-Morales Rene, Paez-Diaz Jessica Alejandra, Rivera-Lopez Edwin Omar, Pérez-Santos Natalia, Borrero-Villabol Sebastián J, Rodríguez-Ramos Josué, Nieves-Rivera Angel M, Rios-Velazquez Carlos

机构信息

Department of Biology, Microbial Biotechnology and Bioprospecting Laboratory, University of Puerto Rico, Mayagüez, Puerto Rico, USA.

Department of Food Science, The Pennsylvania State University, University Park, Pennsylvania, USA.

出版信息

Microbiol Resour Announc. 2025 Jun 12;14(6):e0002225. doi: 10.1128/mra.00022-25. Epub 2025 May 22.

DOI:10.1128/mra.00022-25
PMID:40401940
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12160506/
Abstract

Cave ecosystems harbor unique and diverse microbial ecology, with fungal communities playing important roles. This study utilizes internal transcribed spacer across seven caves in the northern limestone karst belt area of Puerto Rico to investigate fungal composition. This enhances scientific understanding of subterranean microbial dynamics and supports conservation efforts.

摘要

洞穴生态系统拥有独特且多样的微生物生态，其中真菌群落发挥着重要作用。本研究利用波多黎各北部石灰岩岩溶带地区七个洞穴的内转录间隔区来调查真菌组成。这增进了对地下微生物动态的科学理解，并支持了保护工作。

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Sea cucumber () intestinal microbiome dataset from Puerto Rico, generated by shotgun sequencing.来自波多黎各的海参肠道微生物组数据集，通过鸟枪法测序生成。
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The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered.UNITE 数据库：用于真菌和其他真核生物的分子鉴定和分类学交流：序列、分类单元和分类学的再考虑。
Nucleic Acids Res. 2024 Jan 5;52(D1):D791-D797. doi: 10.1093/nar/gkad1039.
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Into the Unknown: Microbial Communities in Caves, Their Role, and Potential Use.探索未知：洞穴中的微生物群落、其作用及潜在用途
Microorganisms. 2022 Jan 20;10(2):222. doi: 10.3390/microorganisms10020222.
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