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离体人脑的7特斯拉多模态磁共振成像数据集。

7 Tesla multimodal MRI dataset of ex-vivo human brain.

作者信息

Zhu Qinfeng, Li Sihui, Cao Zuozhen, Shen Yao, Xu Haoan, Xu Guojun, Li Haotian, Cui Zhaopeng, Zhu Keqing, Zhao Zhiyong, Zhang Jing, Wu Dan

机构信息

Key Laboratory for Biomedical Engineering of Ministry of Education, Department of Biomedical Engineering, College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou, China.

State Key Laboratory of CAD&CG, College of Computer Science, Zhejiang University, Hangzhou, China.

出版信息

Sci Data. 2025 May 22;12(1):845. doi: 10.1038/s41597-025-04932-x.

DOI:10.1038/s41597-025-04932-x
PMID:40404651
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12098661/
Abstract

Ex-vivo MRI offers invaluable insights into the complexity of the human brain, enabling high-resolution anatomical delineation and integration with histopathology, and thus, contributes to both basic and clinical studies on normal and pathological brains. However, ex-vivo MRI is challenging in sample preparation, acquisition, and data analysis, and existing ex-vivo MRI datasets are often single image modality and lack of ethnic diversity. In our study, we aimed to address these limitations by constructing a comprehensive multimodal MRI database acquired from six ex-vivo Chinese human brains. This database included structural MRI, high-angular resolution diffusion MRI, quantitative susceptibility mapping, and quantitative T1 and T2 maps, which enabled multifaceted depiction of brain microstructure and connectivity. Furthermore, we generated population-averaged multimodal templates and the segmentation labels to facilitate analysis of ex-vivo brain MRI. This public database offers a collection of high-resolution and multi-parametric ex-vivo human brain MRI and filled the gap of lacking Asian brain samples in existing databases.

摘要

离体磁共振成像(MRI)为深入了解人类大脑的复杂性提供了宝贵的见解,能够实现高分辨率的解剖学描绘并与组织病理学相结合,从而为正常和病理大脑的基础研究及临床研究做出贡献。然而,离体MRI在样本制备、采集和数据分析方面具有挑战性,并且现有的离体MRI数据集通常是单一图像模态,缺乏种族多样性。在我们的研究中,我们旨在通过构建一个从六个中国离体人脑获取的综合多模态MRI数据库来解决这些局限性。该数据库包括结构MRI、高角分辨率扩散MRI、定量磁化率映射以及定量T1和T2图谱,能够对脑微结构和连通性进行多方面的描绘。此外,我们生成了群体平均多模态模板和分割标签,以促进离体脑MRI分析。这个公共数据库提供了一组高分辨率和多参数的离体人脑MRI,填补了现有数据库中缺乏亚洲脑样本的空白。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/53547f6a35af/41597_2025_4932_Fig9_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/2cea427fbb24/41597_2025_4932_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/53547f6a35af/41597_2025_4932_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/8442fabe54e3/41597_2025_4932_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/40e36f890453/41597_2025_4932_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/b175f5314ee0/41597_2025_4932_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/f2d57989de85/41597_2025_4932_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/b5a5293c46f8/41597_2025_4932_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/8d09422bf174/41597_2025_4932_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/f4d2e7bac6ce/41597_2025_4932_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/2cea427fbb24/41597_2025_4932_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8b2/12098661/53547f6a35af/41597_2025_4932_Fig9_HTML.jpg

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本文引用的文献

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Hum Brain Mapp. 2025 May;46(7):e70222. doi: 10.1002/hbm.70222.
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A diffusion MRI tractography atlas for concurrent white matter mapping across Eastern and Western populations.一份用于东西方人群白质同步映射的扩散磁共振成像纤维束图谱。
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Detailed mapping of the complex fiber structure and white matter pathways of the chimpanzee brain.
详细绘制黑猩猩大脑的复杂纤维结构和白质通路图。
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