Di Domenico Valerio, Theibich Yusuf, Brander Søren, Berrin Jean-Guy, Johansen Katja S, Frandsen Kristian E H, Lo Leggio Leila
Department of Chemistry, University of Copenhagen, Denmark.
Department of Geosciences and Natural Resource Management, University of Copenhagen, Frederiksberg, Denmark.
FEBS J. 2025 Aug;292(16):4375-4389. doi: 10.1111/febs.70138. Epub 2025 May 27.
Lytic polysaccharide monooxygenases (LPMOs) are oxidative enzymes that break the glycosidic linkage in recalcitrant polysaccharides such as cellulose and chitin. The LPMO LsAA9A (AA9 family lytic polysaccharide monooxygenase A) from the basidiomycete fungus Lentinus similis is biochemically and structurally well characterized, with crystallographic complexes with oligosaccharides having been obtained. Chloride ions from the crystallization solution are known to bind to the LsAA9A-substrate complex in crystals at the copper equatorial coordinating position, where activation of the co-substrate oxygen species is expected. An investigation of the effect of high concentration salts on LsAA9A activity showed that salts containing chloride and other halide anions, except for fluoride, had a clear inhibitory effect on the activity at concentrations > 100 mm, although chloride ions are known to increase the LPMO affinity for oligosaccharide binding. Surprisingly, LsAA9A crystals can be transferred for short times to considerably different chemical environments, allowing crystallographic analysis at reduced chloride concentrations. Unfortunately, these washing steps do not eliminate the chloride binding at the copper equatorial coordinating position. Furthermore, we observed that citrate buffer, also present, bound under these changed chemical conditions at the copper active site. This interaction completely blocks access to the oligosaccharide substrate and is additionally supported here by citrate inhibition of LsAA9A activities against azurine cross-linked hydroxyethylcellulose (AZCL-HEC), tamarind xyloglucan, and cellopentaose. The conclusions from our study indicate that citrate should be absolutely avoided in LPMO research, not only because of possible abstraction of copper ions from the LPMO active site but also because it might directly compete with binding of LPMOs to their target substrates.
裂解多糖单加氧酶(LPMOs)是一类氧化酶,可断裂诸如纤维素和几丁质等难降解多糖中的糖苷键。来自担子菌香菇的LPMO LsAA9A(AA9家族裂解多糖单加氧酶A)在生化和结构方面都有很好的表征,并且已获得与寡糖的晶体复合物。已知结晶溶液中的氯离子会在晶体中的铜赤道配位位置与LsAA9A-底物复合物结合,预计在此位置会激活共底物氧物种。一项关于高浓度盐对LsAA9A活性影响的研究表明,除氟化物外,含有氯离子和其他卤化物阴离子的盐在浓度>100 mM时对活性有明显的抑制作用,尽管已知氯离子会增加LPMO对寡糖结合的亲和力。令人惊讶的是,LsAA9A晶体可以短时间转移到截然不同的化学环境中,从而在降低的氯离子浓度下进行晶体学分析。不幸的是,这些洗涤步骤并不能消除铜赤道配位位置的氯离子结合。此外,我们观察到同样存在的柠檬酸盐缓冲液在这些变化的化学条件下会结合在铜活性位点。这种相互作用完全阻断了对寡糖底物的 access,并且在此还得到了柠檬酸盐对LsAA9A针对天蓝交联羟乙基纤维素(AZCL-HEC)、罗望子木葡聚糖和纤维五糖的活性的抑制作用的支持。我们研究的结论表明,在LPMO研究中应绝对避免使用柠檬酸盐,这不仅是因为它可能从LPMO活性位点夺取铜离子,还因为它可能直接与LPMO与其靶底物的结合竞争。