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……中4-羟基苯甲酸分解代谢相关基因的功能与调控

Function and regulation of genes for 4-hydroxybenzoate catabolism in .

作者信息

Xu Nan, Wang Wanyu, Cheng Shuang, Zuo Jiaojiao, Guo Minliang

机构信息

College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China.

出版信息

Appl Environ Microbiol. 2025 Jul 23;91(7):e0025525. doi: 10.1128/aem.00255-25. Epub 2025 Jun 3.

Abstract

is a pathogen that causes tumors in plants. Phenolic acids present in the soil and rhizosphere may affect the interaction between and plants. An important pathway for microorganisms to degrade phenolic acids is the β-ketoadipate pathway, which has been annotated in the genome of . The ability of the PobA (atu4544) enzyme to catalyze the conversion of 4-hydroxybenzoate to protocatechuate was essential for cell growth using 4-hydroxybenzoate as the sole carbon source. The gene is located upstream of , encoding an AraC transcription factor (PobR). Strains with deleted or supplemented exhibited similar growth characteristics on common and phenolic acid-containing carbon sources as strains with deleted or supplemented . Strains with a reporter fusion showed that PobR induced expression. In addition, the use of a reporter fusion showed that PobR represses its expression. Electromobility shift assay revealed that the PobR regulator can bind specifically to DNA. The binding site was identified as CGTGCGATGGTGGATT. Deletions of () and () decreased pathogenicity by infecting carrot roots and kalanchoe leaves, with no effect on genes, and decreased bacterial biomass when phenolic acids were present. The collective findings demonstrate how transcriptional regulation by controls the metabolism of 4-hydroxybenzoate and imply that PobA and PobR aid in bacterial survival during host plant infection.IMPORTANCE is a widely distributed environmental bacterium and a recognized phytopathogen. Phenolic acids influence the relationship between and plants. One of the most important phenolic acids found in soil is 4-hydroxybenzoate, which is generated by plants. Mutants defective in the and genes inhibit tumor development. The -encoded enzyme, PobA, can metabolize 4-hydroxybenzoate, and the expression of its gene is positively regulated by the transcription factor encoded by . The gene is subject to negative autoregulation. The binding site of atu4545 is CGTGCGATGGTCGGATT. Dual regulation of regulators for phenolic acid catabolism may aid in the maintenance of appropriate quantities of phenolic compounds. These results clarify the pathogenic mechanisms of and broaden the understanding of the metabolic control mechanisms of phenolic chemicals.

摘要

是一种能在植物中引发肿瘤的病原体。土壤和根际中存在的酚酸可能会影响其与植物之间的相互作用。微生物降解酚酸的一条重要途径是β-酮己二酸途径,该途径已在其基因组中得到注释。PobA(atu4544)酶催化4-羟基苯甲酸转化为原儿茶酸的能力对于以4-羟基苯甲酸作为唯一碳源的细胞生长至关重要。基因位于基因上游,编码一种AraC转录因子(PobR)。缺失或补充该基因的菌株在普通碳源和含酚酸碳源上的生长特性与缺失或补充该基因的菌株相似。带有报告基因融合体的菌株表明PobR诱导基因表达。此外,使用报告基因融合体表明PobR抑制其自身表达。电泳迁移率变动分析表明PobR调节因子能特异性结合DNA。结合位点被确定为CGTGCGATGGTGGATT。缺失基因()和()通过感染胡萝卜根和长寿花叶片降低了其致病性,对基因没有影响,并且在存在酚酸时细菌生物量减少。这些研究结果共同证明了如何通过转录调控来控制4-羟基苯甲酸的代谢,并暗示PobA和PobR有助于细菌在宿主植物感染期间存活。重要性是一种广泛分布的环境细菌,也是一种公认的植物病原体。酚酸会影响其与植物之间的关系。土壤中发现的最重要的酚酸之一是4-羟基苯甲酸,它由植物产生。基因和基因有缺陷的突变体抑制肿瘤发展。编码的酶PobA可以代谢4-羟基苯甲酸,其基因表达受到编码的转录因子的正调控。基因受到负自调控。atu4545的结合位点是CGTGCGATGGTCGGATT。酚酸分解代谢调节因子的双重调控可能有助于维持酚类化合物的适当数量。这些结果阐明了的致病机制,并拓宽了对酚类化学物质代谢控制机制的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f23a/12285266/388d008c3a00/aem.00255-25.f001.jpg

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