Lyupina Yulia V, Adameyko Kim I, Zubarev Vasiliy M, Cherkasov Alexander V, Ryabova Alina V, Mikhailov Kirill V, Golyshev Sergey A, Burakov Anton V, Finoshin Alexander D, Erokhov Pavel A, Sabirov Marat S, Zhurakovskaya Anna I, Ziganshin Rustam H, Gornostaev Nikolai G, Ignatyuk Vasilina M, Kulikov Aleksei M, Mikhailov Victor S, Gazizova Guzel R, Shagimardanova Elena I, Gusev Oleg A, Khrameeva Ekaterina E, Kravchuk Oksana I
N.K. Koltsov Institute of Developmental Biology, Russian Academy of Sciences, 119334 Moscow, Russia.
Skolkovo Institute of Science and Technology (Skoltech), Center for Molecular and Cellular Biology, 121205 Moscow, Russia.
NAR Genom Bioinform. 2025 Jun 4;7(2):lqaf071. doi: 10.1093/nargab/lqaf071. eCollection 2025 Jun.
The ability of eukaryotic cells to orchestrate mechanical interactions from the subcellular to the organismal levels is mediated by their cytoskeleton. One of the key components of the eukaryotic cytoskeleton is actin, a highly conserved building block of the actin filaments, which interact with many other proteins and underlie diverse cell structures, necessary for organizing intracellular transport, phagocytosis and cell movement. Many organisms have evolved multiple actin variants, which share similar amino acid sequences but differ more dramatically at the gene level, including the presence and number of introns. In the current study, we show that the intron-containing and intronless actin genes are present in the poriferan and that the encoded actins can perform different functions. These actins differ in the gene expression profiles, post-translational modifications, cellular, and subcellular localizations. The intronless actin genes of , , are products of recent duplications, exhibit low divergence between paralogs, and serve as the primary cytoskeletal actins. The divergent intron-containing actin gene, , is differentially expressed in a specific cell lineage and its expression is dependent on the state of cell aggregation, which indicates its unique functions in the morphogenetic processes of the sponge.
真核细胞从亚细胞水平到机体水平协调机械相互作用的能力是由其细胞骨架介导的。真核细胞骨架的关键组成部分之一是肌动蛋白,它是肌动蛋白丝高度保守的构建模块,与许多其他蛋白质相互作用,是构成多种细胞结构的基础,这些结构对于组织细胞内运输、吞噬作用和细胞运动是必需的。许多生物体进化出了多种肌动蛋白变体,它们具有相似的氨基酸序列,但在基因水平上差异更为显著,包括内含子的存在和数量。在本研究中,我们表明含内含子和无内含子的肌动蛋白基因存在于多孔动物中,并且编码的肌动蛋白可以执行不同的功能。这些肌动蛋白在基因表达谱、翻译后修饰、细胞和亚细胞定位方面存在差异。、、的无内含子肌动蛋白基因是近期复制的产物,旁系同源物之间差异较小,并作为主要的细胞骨架肌动蛋白。 divergent含内含子的肌动蛋白基因在特定细胞谱系中差异表达,其表达取决于细胞聚集状态,这表明它在海绵形态发生过程中具有独特功能。