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通过强制线粒体自噬揭示线粒体对哺乳动物多能性的影响。

Unraveling mitochondrial influence on mammalian pluripotency via enforced mitophagy.

作者信息

Schmitz Daniel A, Oura Seiya, Li Leijie, Ding Yi, Dahiya Rashmi, Ballard Emily, Pinzon-Arteaga Carlos, Sakurai Masahiro, Okamura Daiji, Yu Leqian, Ly Peter, Wu Jun

机构信息

Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.

Department of Pathology, University of Texas Southwestern Medical Center, Dallas, TX, USA.

出版信息

Cell. 2025 Jun 5. doi: 10.1016/j.cell.2025.05.020.

DOI:10.1016/j.cell.2025.05.020
PMID:40499542
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12354063/
Abstract

Mitochondrial abundance and genome are crucial for cellular function, with disruptions often associated with disease. However, methods to modulate these parameters for direct functional dissection remain limited. Here, we eliminate mitochondria from pluripotent stem cells (PSCs) by enforced mitophagy and show that PSCs survived for several days in culture without mitochondria. We then leverage enforced mitophagy to generate interspecies PSC fusions that harbor either human or non-human hominid (NHH) mitochondrial DNA (mtDNA). Comparative analyses indicate that human and NHH mtDNA are largely interchangeable in supporting pluripotency in these PSC fusions. However, species divergence between nuclear and mtDNA leads to subtle species-specific transcriptional and metabolic variations. By developing a transgenic enforced mitophagy approach, we further show that reducing mitochondrial abundance leads to delayed development in pre-implantation mouse embryos. Our study opens avenues for investigating the roles of mitochondria in development, disease, and interspecies biology.

摘要

线粒体丰度和基因组对细胞功能至关重要,其破坏往往与疾病相关。然而,用于直接功能剖析以调节这些参数的方法仍然有限。在这里,我们通过强制线粒体自噬从多能干细胞(PSC)中消除线粒体,并表明PSC在没有线粒体的情况下在培养中存活了几天。然后,我们利用强制线粒体自噬产生携带人类或非人类原始人类(NHH)线粒体DNA(mtDNA)的种间PSC融合体。比较分析表明,人类和NHH mtDNA在支持这些PSC融合体的多能性方面在很大程度上是可互换的。然而,核DNA和mtDNA之间的物种差异导致了微妙的物种特异性转录和代谢变化。通过开发一种转基因强制线粒体自噬方法,我们进一步表明,降低线粒体丰度会导致植入前小鼠胚胎发育延迟。我们的研究为研究线粒体在发育、疾病和种间生物学中的作用开辟了途径。

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本文引用的文献

1
Reduced Protein Import via TIM23 SORT Drives Disease Pathology in TIMM50-Associated Mitochondrial Disease.通过 TIM23 SORT 减少蛋白输入会导致 TIMM50 相关的线粒体疾病的病理变化。
Mol Cell Biol. 2024;44(6):226-244. doi: 10.1080/10985549.2024.2353652. Epub 2024 Jun 3.
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Mitochondrial heterogeneity and adaptations to cellular needs.线粒体异质性与细胞需求的适应
Nat Cell Biol. 2024 May;26(5):674-686. doi: 10.1038/s41556-024-01410-1. Epub 2024 May 16.
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Pyrimidines maintain mitochondrial pyruvate oxidation to support de novo lipogenesis.嘧啶类物质维持线粒体丙酮酸氧化以支持从头脂肪生成。
Science. 2024 Mar 29;383(6690):1484-1492. doi: 10.1126/science.adh2771. Epub 2024 Mar 28.
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Cell-type-specific -regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells.人类-黑猩猩杂交细胞揭示的基因表达和染色质可及性的细胞类型特异性调控分歧。
Elife. 2024 Feb 15;12:RP89594. doi: 10.7554/eLife.89594.
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The Gene Ontology knowledgebase in 2023.2023 版基因本体论知识库。
Genetics. 2023 May 4;224(1). doi: 10.1093/genetics/iyad031.
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Mitochondria metabolism sets the species-specific tempo of neuronal development.线粒体代谢设定了神经元发育的物种特异性节奏。
Science. 2023 Feb 10;379(6632):eabn4705. doi: 10.1126/science.abn4705.
8
Accounting for cis-regulatory constraint prioritizes genes likely to affect species-specific traits.考虑顺式调控约束可以优先考虑那些可能影响物种特异性特征的基因。
Genome Biol. 2023 Jan 19;24(1):11. doi: 10.1186/s13059-023-02846-8.
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Metabolic regulation of species-specific developmental rates.物种特异性发育速率的代谢调控。
Nature. 2023 Jan;613(7944):550-557. doi: 10.1038/s41586-022-05574-4. Epub 2023 Jan 4.
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Nuclear localization of mitochondrial TCA cycle enzymes modulates pluripotency via histone acetylation.线粒体 TCA 循环酶的核定位通过组蛋白乙酰化调节多能性。
Nat Commun. 2022 Dec 2;13(1):7414. doi: 10.1038/s41467-022-35199-0.