• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于Python的两个程序在细菌感染期间对脑内皮紧密连接表型进行自动分析的体外比较

In Vitro Comparison of Two Python-Based Programs for the Automated Analysis of Tight-Junction Phenotype in Brain Endothelium During Bacterial Infection.

作者信息

Mauser Henry D, Caroza Janessa, Homez Shane Nicole, Arnett Alyssa S, Cutts William D, Lam Daryl W, Thornton Justin, Adams Walter, Kim Brandon J

机构信息

Department of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, USA.

Department of Biological Sciences, San Jose State University, San Jose, California, USA.

出版信息

Cell Biochem Funct. 2025 Jun;43(6):e70093. doi: 10.1002/cbf.70093.

DOI:10.1002/cbf.70093
PMID:40522279
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12169080/
Abstract

Tight junction complexes are crucial features of brain endothelial cells, as they restrict the paracellular route across the blood-brain barrier. Tight junction disruption has been observed in conjunction with numerous diseases of the CNS. In such cases, the organization or integrity of cell-cell junctions may be analyzed with a variety of automated computer programs that quantitatively assess junction images. Here, we directly compare two previously developed python-based programs-JAnaP and IJOQ- for the semi- or fully automated analysis of tight junctions in human stem cell-derived brain-like endothelial cells. Cells were infected with S. pneumoniae and S. agalactiae to initiate junction disruption, and occludin and ZO-1 were analyzed in mock and infected groups via JAnaP and IJOQ. JAnaP and IJOQ both yielded comparable results for the quantification of tight junction disruption in brain endothelial cells. While JAnaP rendered data at the cellular level and gave more information regarding junction phenotype, IJOQ significantly reduced user time and eliminated potential user bias. Our results suggest that JAnaP and IJOQ are both appropriate for quantifying tight junction integrity in brain endothelial cells, and both may offer distinct advantages depending on their context of use.

摘要

紧密连接复合体是脑内皮细胞的关键特征,因为它们限制了跨血脑屏障的细胞旁途径。紧密连接破坏已在多种中枢神经系统疾病中被观察到。在这种情况下,可以使用各种自动计算机程序来分析细胞间连接的组织或完整性,这些程序可以定量评估连接图像。在这里,我们直接比较两个先前开发的基于Python的程序——JAnaP和IJOQ——用于对人干细胞衍生的脑样内皮细胞中的紧密连接进行半自动或全自动分析。用肺炎链球菌和无乳链球菌感染细胞以引发连接破坏,并通过JAnaP和IJOQ在未感染组和感染组中分析闭合蛋白和紧密连接蛋白1。JAnaP和IJOQ在定量脑内皮细胞紧密连接破坏方面都产生了可比的结果。虽然JAnaP在细胞水平上提供数据并给出了更多关于连接表型的信息,但IJOQ显著减少了用户时间并消除了潜在的用户偏差。我们的结果表明,JAnaP和IJOQ都适用于定量脑内皮细胞中的紧密连接完整性,并且根据其使用背景两者可能都具有独特的优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/897d3de1499b/CBF-43-e70093-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/62d2d280f502/CBF-43-e70093-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/f5ff97fc64f9/CBF-43-e70093-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/897d3de1499b/CBF-43-e70093-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/62d2d280f502/CBF-43-e70093-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/f5ff97fc64f9/CBF-43-e70093-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/165f/12169080/897d3de1499b/CBF-43-e70093-g003.jpg

相似文献

1
In Vitro Comparison of Two Python-Based Programs for the Automated Analysis of Tight-Junction Phenotype in Brain Endothelium During Bacterial Infection.基于Python的两个程序在细菌感染期间对脑内皮紧密连接表型进行自动分析的体外比较
Cell Biochem Funct. 2025 Jun;43(6):e70093. doi: 10.1002/cbf.70093.
2
Non-pharmacological interventions for sleep promotion in hospitalized children.促进住院儿童睡眠的非药物干预措施。
Cochrane Database Syst Rev. 2022 Jun 15;6(6):CD012908. doi: 10.1002/14651858.CD012908.pub2.
3
Stakeholders' perceptions and experiences of factors influencing the commissioning, delivery, and uptake of general health checks: a qualitative evidence synthesis.利益相关者对影响一般健康检查的委托、提供和接受因素的看法与体验:一项定性证据综合分析
Cochrane Database Syst Rev. 2025 Mar 20;3(3):CD014796. doi: 10.1002/14651858.CD014796.pub2.
4
Clinical rating scales for assessing pain in newborn infants.评估新生儿疼痛的临床评定量表。
Cochrane Database Syst Rev. 2025 Apr 14;4(4):MR000064. doi: 10.1002/14651858.MR000064.pub2.
5
Mucolytics for children with chronic suppurative lung disease.用于患有慢性化脓性肺病儿童的黏液溶解剂。
Cochrane Database Syst Rev. 2025 Mar 28;3(3):CD015313. doi: 10.1002/14651858.CD015313.pub2.
6
Anti-VEGF drugs compared with laser photocoagulation for the treatment of diabetic retinopathy: a systematic review and meta-analysis.抗血管内皮生长因子药物与激光光凝术治疗糖尿病性视网膜病变的比较:一项系统评价和荟萃分析。
Health Technol Assess. 2024 Dec 11:1-71. doi: 10.3310/PCGV5709.
7
Aural toilet (ear cleaning) for chronic suppurative otitis media.慢性化脓性中耳炎的耳道清理(耳部清洁)
Cochrane Database Syst Rev. 2025 Jun 9;6(6):CD013057. doi: 10.1002/14651858.CD013057.pub3.
8
Stem cell injections for osteoarthritis of the knee.用于膝关节骨关节炎的干细胞注射
Cochrane Database Syst Rev. 2025 Apr 2;4(4):CD013342. doi: 10.1002/14651858.CD013342.pub2.
9
Anti-VEGF drugs compared with laser photocoagulation for the treatment of proliferative diabetic retinopathy: a systematic review and individual participant data meta-analysis.抗血管内皮生长因子药物与激光光凝术治疗增殖性糖尿病视网膜病变的比较:一项系统评价和个体参与者数据荟萃分析
Health Technol Assess. 2025 Apr 2:1-75. doi: 10.3310/MJYP6578.
10
Assessing the comparative effects of interventions in COPD: a tutorial on network meta-analysis for clinicians.评估慢性阻塞性肺疾病干预措施的比较效果:面向临床医生的网状Meta分析教程
Respir Res. 2024 Dec 21;25(1):438. doi: 10.1186/s12931-024-03056-x.

本文引用的文献

1
The Basic Requirement of Tight Junction Proteins in Blood-Brain Barrier Function and Their Role in Pathologies.紧密连接蛋白在血脑屏障功能中的基本要求及其在病理学中的作用。
Int J Mol Sci. 2024 May 21;25(11):5601. doi: 10.3390/ijms25115601.
2
extracellular vesicles aggravate alveolar epithelial barrier disruption via autophagic degradation of OCLN (occludin).细胞外囊泡通过自噬降解 OCLN(紧密连接蛋白)加重肺泡上皮屏障破坏。
Autophagy. 2024 Jul;20(7):1577-1596. doi: 10.1080/15548627.2024.2330043. Epub 2024 Apr 21.
3
infection of human small intestinal epithelial cells induces type III interferon and impairs infectivity of Rotavirus.
人小肠上皮细胞感染诱导 III 型干扰素,并损害轮状病毒的感染力。
Gut Microbes. 2024 Jan-Dec;16(1):2297897. doi: 10.1080/19490976.2023.2297897. Epub 2024 Jan 8.
4
Disease Burden of Meningitis Caused by Streptococcus pneumoniae Among Under-Fives in China: A Systematic Review and Meta-analysis.中国五岁以下儿童肺炎链球菌所致脑膜炎的疾病负担:一项系统评价与荟萃分析
Infect Dis Ther. 2023 Nov;12(11):2567-2580. doi: 10.1007/s40121-023-00878-y. Epub 2023 Oct 14.
5
COVID-19 and Long COVID: Disruption of the Neurovascular Unit, Blood-Brain Barrier, and Tight Junctions.COVID-19 和长新冠:神经血管单元、血脑屏障和紧密连接的破坏。
Neuroscientist. 2024 Aug;30(4):421-439. doi: 10.1177/10738584231194927. Epub 2023 Sep 11.
6
Pore-forming activity of pneumolysin disrupts the paracellular localization of the epithelial adherens junction protein E-cadherin.肺炎链球菌溶血素的孔形成活性破坏了上皮细胞间紧密连接蛋白 E-钙黏蛋白的细胞旁定位。
Infect Immun. 2023 Sep 14;91(9):e0021323. doi: 10.1128/iai.00213-23. Epub 2023 Aug 21.
7
Coxsackievirus B3 infects and disrupts human induced-pluripotent stem cell derived brain-like endothelial cells.柯萨奇病毒 B3 感染并破坏人类诱导多能干细胞衍生的类脑细胞内皮细胞。
Front Cell Infect Microbiol. 2023 Apr 17;13:1171275. doi: 10.3389/fcimb.2023.1171275. eCollection 2023.
8
The tight junction protein occludin modulates blood-brain barrier integrity and neurological function after ischemic stroke in mice.紧密连接蛋白紧密连接蛋白 occludin 调节缺血性中风后小鼠血脑屏障的完整性和神经功能。
Sci Rep. 2023 Feb 18;13(1):2892. doi: 10.1038/s41598-023-29894-1.
9
Development of a multicellular in vitro model of the meningeal blood-CSF barrier to study Neisseria meningitidis infection.开发一种脑膜血脑屏障的体外多细胞模型,以研究脑膜炎奈瑟菌感染。
Fluids Barriers CNS. 2022 Oct 26;19(1):81. doi: 10.1186/s12987-022-00379-z.
10
Differential Response to the Course of Cryptosporidium parvum Infection and Its Impact on Epithelial Integrity in Differentiated versus Undifferentiated Human Intestinal Enteroids.对微小隐孢子虫感染过程的差异反应及其对分化与未分化人肠类器官上皮完整性的影响。
Infect Immun. 2022 Nov 17;90(11):e0039722. doi: 10.1128/iai.00397-22. Epub 2022 Oct 26.