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沿海海底微生物群由全球分布类群的局部选择构建而成。

The Coastal Seafloor Microbiota Is Structured by Local Selection of Cosmopolitan Taxa.

作者信息

Rudi Knut, Nilsen Tonje, Pettersen Ragnhild, Keeley Nigel Brian, Ray Jessica Louise, Majaneva Sanna, Stokkan Morten, Hervik Anja, Angell Inga Leena, Philip Melcy, Martin Julie, Sundt Maud Ødegaard, Snipen Lars Gustav

机构信息

Norwegian University of Life Sciences, Ås, Norway.

Akvaplan-Niva, Tromsø, Norway.

出版信息

Environ Microbiol Rep. 2025 Jun;17(3):e70123. doi: 10.1111/1758-2229.70123.

Abstract

Understanding the assembly processes of the coastal seafloor microbiota is crucial for gaining insights into how ocean ecosystems work. In our study, we addressed the question about how local selection affects the global distribution of coastal seafloor microorganisms. We identified two main clusters of samples by examining the geographical distribution of 356 high-quality prokaryote metagenome-assembled genomes (MAGs) from 94 coastal samples collected along the Norwegian and Icelandic coasts. There was no identifiable correlation between the abundance of MAGs and the geographic distance between them central to the identified clusters (no distance decay). In contrast, noncentral MAGs demonstrate a pronounced distance decay. We also observed significant functional differences between the two sample clusters. One cluster showed enrichment in functions such as dissimilatory nitrate reduction to ammonium (DNRA), acetoclastic methanogenesis, thiosulphate conversion and acetate and butyrate metabolism. The other cluster was enriched in propionate metabolism, nitrite oxidation to nitrate and cobalamin-dependent carbon fixation. These results suggest that localised environmental selection acts on cosmopolitan taxa to shape seafloor microbiota. Our findings therefore profoundly impact the understanding of seafloor ecological processes and their management.

摘要

了解沿海海底微生物群的组装过程对于深入了解海洋生态系统的运作方式至关重要。在我们的研究中,我们探讨了局部选择如何影响沿海海底微生物的全球分布这一问题。通过检查从挪威和冰岛海岸采集的94个沿海样本中356个高质量原核生物宏基因组组装基因组(MAG)的地理分布,我们确定了两个主要的样本簇。MAG的丰度与其在已识别簇中心之间的地理距离之间没有可识别的相关性(无距离衰减)。相比之下,非中心MAG表现出明显的距离衰减。我们还观察到两个样本簇之间存在显著的功能差异。一个簇在诸如异化硝酸盐还原为铵(DNRA)、乙酸裂解产甲烷、硫代硫酸盐转化以及乙酸和丁酸代谢等功能方面表现出富集。另一个簇在丙酸盐代谢、亚硝酸盐氧化为硝酸盐以及钴胺素依赖性碳固定方面表现出富集。这些结果表明,局部环境选择作用于世界性分类群,从而塑造了海底微生物群。因此,我们的发现对海底生态过程及其管理的理解产生了深远影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6797/12178751/2a085af25575/EMI4-17-e70123-g004.jpg

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