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鳟鱼沼泽湖电活性浮游细菌的隐秘循环

Cryptic cycling by electroactive bacterioplankton in Trout Bog Lake.

作者信息

Olmsted Charles N, Gahler Mark, Roden Eric, Peterson Ben, Lazarcik James, Tran Patricia Q, Berg Maureen, Bryant Donald A, Goudeau Danielle, Malmstrom Rex R, Qin Mohan, McMahon Katherine D

机构信息

Department of Molecular and Environmental Toxicology, Universities of Wisconsin, Madison, Wisconsin, USA.

Trout Lake Station, Center for Limnology, University of Wisconsin-Madison, Madison, Wisconsin, USA.

出版信息

Appl Environ Microbiol. 2025 Jul 23;91(7):e0178924. doi: 10.1128/aem.01789-24. Epub 2025 Jun 20.

Abstract

The potential for extracellular electron transfer (EET) is a prevailing genomic feature of humic lake bacterioplankton. However, there has been little evidence for the substantial ecological contribution predicted by genetics. We hypothesized that anoxygenic phototrophic electrotrophs and accompanying heterotrophic electrogens cycle dissolved organic matter (DOM) between oxidized and reduced states. We predicted that such bacterioplankton would exhibit diel-scale oscillations due to the light dependency of photosynthesis. Using Trout Bog Lake in Wisconsin, USA, as our model ecosystem, we profiled the water column with depth-discrete metagenomic, physiochemical, and electrochemical analyses. We observed variation in oxidation reduction potential (ORP) in response to sunlight, initiating at depths populated by anoxygenic phototrophs with EET genes. We developed an automated buoy to measure electric current flow between many pairs of electrodes simultaneously, observing correlation in electron consumption to sunlight. Our results, combined with published metatranscriptomic analysis, indicate the occurrence of electron cycling between phototrophic oxidation (electrotrophic metabolism) by and anaerobic respiration (electrogenic metabolism) by , involving DOM. We also repeatedly observed gradual seasonal increases in hypolimnion ORP throughout summer. These diel and seasonal patterns imply that electroactive DOM mediates the ecology of electroactive bacteria in lakes, controlling humic lake methane emissions.IMPORTANCEWe investigated the physical, chemical, and redox characteristics of a bog lake and electrodes hung therein to test the hypothesis that dissolved organic matter is being cycled between oxidized and reduced states by electroactive bacterioplankton powered by phototrophy. To do so, we performed field-based analyses on multiple timescales using both established and novel instrumentation. We paired these analyses with recently developed bioinformatics pipelines for metagenomics data to investigate genes that enable electroactive metabolism and accompanying metabolisms. Our results are consistent with our hypothesis and yet upend some of our other expectations. Our findings have implications for understanding greenhouse gas emissions from lakes, including electroactivity as an integral part of lake metabolism throughout more of the anoxic parts of lakes and for a longer portion of the summer than expected. Our results also give a sense of what electroactivity occurs at given depths and provide a strong basis for future studies.

摘要

细胞外电子转移(EET)的潜力是腐殖质湖泊浮游细菌普遍存在的基因组特征。然而,几乎没有证据表明遗传学预测的重大生态贡献。我们假设,无氧光合电营养菌以及伴随的异养产电菌在氧化态和还原态之间循环溶解有机物(DOM)。我们预测,由于光合作用对光的依赖性,此类浮游细菌会呈现昼夜尺度的振荡。以美国威斯康星州的鳟鱼沼泽湖作为我们的模型生态系统,我们通过深度离散的宏基因组学、物理化学和电化学分析对水柱进行了剖析。我们观察到氧化还原电位(ORP)随阳光变化,始于存在EET基因的无氧光合营养菌所在深度。我们开发了一个自动浮标,用于同时测量多对电极之间的电流,观察到电子消耗与阳光之间的相关性。我们的结果与已发表的宏转录组分析相结合,表明在光养氧化(电营养代谢)和厌氧呼吸(产电代谢)之间存在涉及DOM的电子循环。我们还反复观察到整个夏季湖下层ORP逐渐季节性升高。这些昼夜和季节性模式表明,电活性DOM介导了湖泊中电活性细菌的生态,控制着腐殖质湖泊的甲烷排放。

重要性

我们研究了一个沼泽湖及其内悬挂电极的物理、化学和氧化还原特征,以检验以下假设:溶解有机物在由光养驱动的电活性浮游细菌作用下在氧化态和还原态之间循环。为此,我们使用既定和新型仪器在多个时间尺度上进行了实地分析。我们将这些分析与最近开发的用于宏基因组学数据的生物信息学管道相结合,以研究实现电活性代谢及伴随代谢的基因。我们的结果与我们的假设一致,但也颠覆了我们的一些其他预期。我们的发现对于理解湖泊的温室气体排放具有重要意义,包括电活性作为湖泊代谢中更大部分缺氧区域以及比预期更长的夏季时间内湖泊代谢的一个组成部分。我们的结果还给出了给定深度处电活性情况的概念,并为未来研究提供了坚实基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2bdf/12285243/eb38b323bf73/aem.01789-24.f001.jpg

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