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用于传染性病原体废水和环境监测的最佳采样频率和地点选择:信息价值评估

Optimal sampling frequency and site selection for wastewater and environmental surveillance of infectious pathogens: A value of information assessment.

作者信息

Impalli Isabella, Bergland Erik, Saad-Roy Chadi M, Grenfell Bryan T, Levin Simon A, Larsson D G Joakim, Laxminarayan Ramanan

机构信息

One Health Trust, Washington, DC, United States of America.

Miller Institute for Basic Research in Science, University of California, Berkeley, California, United States of America.

出版信息

PLoS Comput Biol. 2025 Jun 25;21(6):e1013190. doi: 10.1371/journal.pcbi.1013190. eCollection 2025 Jun.

Abstract

Wastewater and environmental surveillance (WES) is a promising method of detecting infectious diseases in human and animal populations and offers significant advantages over traditional surveillance methods in the early detection of outbreaks. However, WES involves financial and human resources, and public policy decisions must determine whether the benefits of WES outweigh the costs, particularly in low-resource areas. The selection of surveillance sites, sampling frequency, and test sensitivity and specificity are crucial determinants of WES effectiveness and cost-efficiency. We created an analytical model and numerical simulations of disease arrival, spread, and WES strategies to determine the optimal sampling frequency for two interacting patches, each represented by a different sampling site. We show that it is optimal to test in one patch more frequently than it is to test in both patches less frequently if the patches are sufficiently interactive, surveillance is of sufficient sensitivity and specificity, and setup costs are substantial. In our value of information (VOI) assessment, the net value of surveillance information for both patches is non-monotonic with respect to the degree of patch interaction. Increased mixing between the patches allows for quicker surveillance detection but is worse for overall infection burden. Overall, optimizing the value of surveillance information for all patches being surveilled requires coordination and deliberate selection of surveillance sites and sampling frequencies. This paper provides a VOI assessment of WES to determine the optimal number of sites and sampling frequency at a high level of abstraction, leaving opportunity to adapt the model to specific pathogens and populations as needed. Our findings can inform the cost-efficient implementation of WES for infectious diseases, particularly in resource-constrained settings.

摘要

废水与环境监测(WES)是一种很有前景的检测人类和动物群体中传染病的方法,在疾病暴发的早期检测方面比传统监测方法具有显著优势。然而,WES需要资金和人力资源,公共政策决策必须确定WES的益处是否超过成本,特别是在资源匮乏地区。监测地点的选择、采样频率以及检测的灵敏度和特异性是WES有效性和成本效益的关键决定因素。我们创建了一个疾病传入、传播和WES策略的分析模型及数值模拟,以确定两个相互作用区域(每个区域由一个不同的采样点代表)的最佳采样频率。我们表明,如果区域之间具有足够的相互作用、监测具有足够的灵敏度和特异性且设置成本很高,那么在一个区域进行更频繁的检测比在两个区域都进行较低频率的检测更为优化。在我们的信息价值(VOI)评估中, 两个区域的监测信息净值相对于区域相互作用程度而言是非单调的。区域之间混合程度的增加能够实现更快的监测检测,但对总体感染负担更为不利。总体而言,要优化所有被监测区域的监测信息价值,需要对监测地点和采样频率进行协调和审慎选择。本文提供了一个WES的VOI评估,以在高度抽象的层面上确定最佳的监测点数和采样频率,从而有机会根据需要使模型适应特定的病原体和人群。我们的研究结果可为传染病WES的成本效益实施提供参考,特别是在资源受限的环境中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9217/12193039/32d20db498ff/pcbi.1013190.g001.jpg

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