Katanyuphan Yada, Krajaejun Pipad, Wattanapituksakul Athiwat, Surat Wunrada
Department of Genetics, Faculty of Science, Kasetsart University, Bangkok 10900, Thailand.
Department of History, Faculty of Liberal Arts, Thammasat University, Pathum Thani 12120, Thailand.
Animals (Basel). 2025 Jun 6;15(12):1678. doi: 10.3390/ani15121678.
The Javan rhino is a critically endangered species that has become extinct in several Asian countries, including Thailand. There are three Javan rhino subspecies: , , and , and the first two subspecies existed in Thailand decades ago. However, no genetic study on Thai rhinos has been reported. In this study, we amplified a partial D-loop region of two ancient rhino specimens dated to approximately 100 years before present, from southwest Thailand. Then, we constructed phylogenetic trees and a haplotype network based on the D-loop sequences of the Thai rhinos and 39 Javan, Sumatran, and Indian rhinos from the GenBank database. The ancient Thai rhino DNA belonged to Javan rhinos and was clearly separated from and . The nucleotide differences among the ancient Thai, , and rhino DNA were 5.14-8.30%, similar to those between two white rhino subspecies. Moreover, species delimitation analyses confirmed that the ancient Thai rhinos should belong to another Javan rhino subspecies, possibly the extinct Indian Javan rhino. This is the first report of rhino DNA from Thailand and possibly the Indian Javan rhino DNA, which could be used for evolutionary studies.
爪哇犀是一种极度濒危的物种,在包括泰国在内的几个亚洲国家已经灭绝。爪哇犀有三个亚种: 、 和 ,前两个亚种几十年前曾存在于泰国。然而,尚未有关于泰国犀牛的基因研究报告。在本研究中,我们扩增了来自泰国西南部、距今约100年前的两个古代犀牛标本的部分D-loop区域。然后,我们基于泰国犀牛以及来自GenBank数据库的39头爪哇犀、苏门答腊犀和印度犀的D-loop序列构建了系统发育树和单倍型网络。古代泰国犀牛的DNA属于爪哇犀,并且与 和 明显分开。古代泰国犀牛、 和 犀牛DNA之间的核苷酸差异为5.14 - 8.30%,与两个白犀亚种之间的差异相似。此外,物种界定分析证实,古代泰国犀牛应属于另一个爪哇犀亚种,可能是已灭绝的印度爪哇犀。这是来自泰国的犀牛DNA以及可能是印度爪哇犀DNA的首次报告,可用于进化研究。