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产纤维素菌株嗜糖 Komagataeibacter sucrofermentans SMEG01 的全基因组分析

Complete genome analysis of the cellulose producing strain Komagataeibacter sucrofermentans SMEG01.

作者信息

Deng Shuaijun, Wang Lei, Chen Guoqiang, Qin Qilong, Dong Sheng, Zhang Haibo

机构信息

Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China.

University of Chinese Academy of Sciences, Beijing, 10049, China.

出版信息

Sci Rep. 2025 Jul 2;15(1):23102. doi: 10.1038/s41598-025-07045-y.

Abstract

Bacterial cellulose (BC) has been extensively utilized across various industries due to its unique properties, however, the high production cost remains a significant limiting factor for broader application. Understanding the genetic background of BC-producing strains through genome sequencing is an effective strategy for optimizing BC synthesis and reducing production costs. Komagataeibacter sucrofermentans SMEG01, a high-yield bacterial cellulose producer, has a total genome length of 3.44 Mbp with 3,276 annotated genes. The strain possesses fully functional pentose phosphate pathway, Entner-Doudoroff pathway, pyruvate metabolism, and tricarboxylic acid cycle, but lacks the gene encoding phosphofructokinase, resulting in an incomplete glycolytic pathway. This strain demonstrates the ability to utilize various carbon sources for BC production and exhibits notable acid tolerance, making it a promising candidate for industrial applications. The genome sequence reveals the presence of four bcs operons on the chromosome, placing it among the strains with the highest number of such operons, contributing to its high cellulose production potential. Comparative genomic analysis elucidates the genetic relationships, unique features, and environmental adaptation mechanisms of K. sucrofermentans SMEG01 in relation to other Komagataeibacter species, providing valuable targets for future genetic engineering applications.

摘要

细菌纤维素(BC)因其独特的性质已在各个行业中得到广泛应用,然而,高生产成本仍然是其更广泛应用的一个重大限制因素。通过基因组测序了解产BC菌株的遗传背景是优化BC合成和降低生产成本的有效策略。嗜糖 Komagataeibacter sucrofermentans SMEG01是一种高产细菌纤维素生产者,其基因组全长3.44 Mbp,有3276个注释基因。该菌株拥有完整功能的磷酸戊糖途径、Entner-Doudoroff途径、丙酮酸代谢和三羧酸循环,但缺乏编码磷酸果糖激酶的基因,导致糖酵解途径不完整。该菌株展示了利用多种碳源生产BC的能力,并表现出显著的耐酸性,使其成为工业应用的有前途的候选菌株。基因组序列揭示了染色体上存在四个bcs操纵子,使其成为拥有此类操纵子数量最多的菌株之一,这有助于其高纤维素生产潜力。比较基因组分析阐明了嗜糖 Komagataeibacter sucrofermentans SMEG01与其他Komagataeibacter物种的遗传关系、独特特征和环境适应机制,为未来的基因工程应用提供了有价值的靶点。

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