Qu Jiangyong, Yang Xueying, Song Zhuoran, Wang Shuang, Xing Zhikai, Wang Lijun, Wang Xumin
School of Life Science, Yantai University, Yantai, Shandong, 264005, China.
Sci Data. 2025 Jul 2;12(1):1133. doi: 10.1038/s41597-025-05288-y.
In the classification of marine fish, the Labridae family ranks second in terms of species diversity and plays a vital role in coral reef ecosystems, comprising over 600 species across 82 genera. Despite its significance for ecological and evolutionary studies, genomic research on this group has lagged, resulting in a shortage of data, particularly regarding high-quality chromosome-level genome assemblies. To address this gap, this study focused on Cheilinus chlorourus from the Labridae family and successfully achieved a chromosome-level genome assembly. By integrating Illumina, PacBio, and Hi-C sequencing data, we assembled a genome measuring 940.36 Mb, with 926.86 Mb (98.56%) of the gene assembly organized into 21 chromosomes. A total of 29,213 protein-coding genes (PCGs) were identified, and 79.93% of these genes were functionally annotated. With this high-quality genome assembly, future investigations into the functional genomics and ecology of C. chlorourus will have a solid scientific foundation.
在海洋鱼类分类中,隆头鱼科在物种多样性方面排名第二,在珊瑚礁生态系统中发挥着至关重要的作用,该科涵盖82个属的600多种鱼类。尽管其对生态和进化研究具有重要意义,但对该类群的基因组研究却滞后了,导致数据短缺,尤其是高质量的染色体水平基因组组装数据。为填补这一空白,本研究聚焦于隆头鱼科的绿唇鱼,并成功完成了染色体水平的基因组组装。通过整合Illumina、PacBio和Hi-C测序数据,我们组装出一个大小为940.36 Mb的基因组,其中926.86 Mb(98.56%)的基因组装被组织成21条染色体。共鉴定出29213个蛋白质编码基因(PCG),其中79.93%的基因得到了功能注释。有了这个高质量的基因组组装,未来对绿唇鱼功能基因组学和生态学的研究将有坚实的科学基础。