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在氧杂环丁烷核苷的生物合成过程中产生了一种[2.1.0]稠合双环中间体。

A [2.1.0]-Fused Bicyclic Intermediate Is Produced during the Biosynthesis of Oxetane Nucleosides.

作者信息

Lee Yu-Hsuan, Fan Po-Hsun, Yeh Yu-Cheng, Ruszczycky Mark W, Geng Yujie, Zhong Aoshu, Liu Hung-Wen

机构信息

Department of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.

Division of Chemical Biology & Medicinal Chemistry, College of Pharmacy, University of Texas at Austin, Austin, Texas 78712, United States.

出版信息

J Am Chem Soc. 2025 Jul 23;147(29):25224-25232. doi: 10.1021/jacs.5c01831. Epub 2025 Jul 11.

Abstract

AlsB and OxsB are homologous B-dependent radical -adenosyl-l-methionine enzymes involved in the biosynthesis of the oxetane nucleosides albucidin and oxetanocin A. Both pathways also require a second enzyme (AlsA and OxsA, respectively) to complete the biosynthesis of the oxetane ring. Herein, OxsB and AlsB are both shown to catalyze an intramolecular C-C bond formation between two -hybridized carbons in 5-phosphates of 2-deoxyadenosine to yield corresponding phosphates of the same highly strained [2.1.0]-bicyclic species. This compound undergoes nonenzymatic decomposition; however, in the presence of OxsA or AlsA, it is instead converted to oxetanocin A aldehyde phosphate or albucidin phosphate, respectively. This completes the description of oxetanocin A and albucidin biosynthetic pathways. Formation of the bicyclic intermediate involves hydrogen atom abstraction from both C2 and C4 in the substrate, which suggests an unprecedented catalytic role for cobalamin in stabilizing a carbon radical intermediate, thereby facilitating an intramolecular radical recombination reaction.

摘要

AlsB和OxsB是参与氧杂环丁烷核苷阿比西丁和氧杂环丁菌素A生物合成的同源B依赖性自由基-腺苷-L-甲硫氨酸酶。这两条途径还都需要第二种酶(分别为AlsA和OxsA)来完成氧杂环丁烷环的生物合成。在此,已表明OxsB和AlsB均催化2-脱氧腺苷5-磷酸中两个sp³杂化碳之间的分子内C-C键形成,以产生相同高张力的[2.1.0]双环物种的相应磷酸盐。该化合物会发生非酶促分解;然而,在存在OxsA或AlsA的情况下,它反而分别转化为氧杂环丁菌素A醛磷酸盐或阿比西丁磷酸盐。这完成了对氧杂环丁菌素A和阿比西丁生物合成途径的描述。双环中间体的形成涉及从底物中的C2和C4提取氢原子,这表明钴胺素在稳定碳自由基中间体方面具有前所未有的催化作用,从而促进分子内自由基重组反应。

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