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自由基S-腺苷甲硫氨酸酶化学中的引发、传播和终止

Initiation, Propagation, and Termination in the Chemistry of Radical SAM Enzymes.

作者信息

Ruszczycky Mark W, Liu Hung-Wen

机构信息

Division of Chemical Biology & Medicinal Chemistry, College of Pharmacy, University of Texas at Austin, Austin, Texas 78712, United States.

Department of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.

出版信息

Biochemistry. 2024 Dec 17;63(24):3161-3183. doi: 10.1021/acs.biochem.4c00518. Epub 2024 Dec 3.

Abstract

Radical -adenosyl-l-methionine (SAM) enzymes catalyze radical mediated chemical transformations notable for their diversity. The radical mediated reactions that take place in their catalytic cycles can be characterized with respect to one or more phases of initiation, propagation, and termination. Mechanistic models abound regarding these three phases of catalysis being regularly informed and updated by new discoveries that offer insights into their detailed workings. However, questions continue to be raised that touch on fundamental aspects of their mechanistic enzymology. Radical SAM enzymes are consequently far from fully understood, and this Perspective aims to outline some of the current models of radical SAM chemistry with an emphasis on lines of investigation that remain to be explored.

摘要

自由基 - 腺苷 - L - 甲硫氨酸(SAM)酶催化以其多样性而闻名的自由基介导的化学转化。在其催化循环中发生的自由基介导反应可根据引发、传播和终止的一个或多个阶段进行表征。关于催化的这三个阶段的机制模型众多,并且会定期根据新发现进行补充和更新,这些新发现为其详细作用机制提供了见解。然而,关于其机制酶学的基本方面仍不断有问题被提出。因此,自由基SAM酶远未被完全理解,本综述旨在概述一些当前的自由基SAM化学模型,重点关注仍有待探索的研究方向。

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本文引用的文献

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Radical SAM Enzyme PylB Generates a Lysyl Radical Intermediate in the Biosynthesis of Pyrrolysine by Using SAM as a Cofactor.
J Am Chem Soc. 2024 Mar 13;146(10):6544-6556. doi: 10.1021/jacs.3c11266. Epub 2024 Mar 1.
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Radical -Adenosyl-l-Methionine Enzyme PylB: A C-Centered Radical to Convert l-Lysine into (3)-3-Methyl-d-Ornithine.
J Am Chem Soc. 2024 Mar 13;146(10):6493-6505. doi: 10.1021/jacs.3c03747. Epub 2024 Mar 1.
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ACS Chem Biol. 2024 Feb 16;19(2):370-379. doi: 10.1021/acschembio.3c00583. Epub 2024 Jan 31.
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Discovery of a Biotin Synthase That Utilizes an Auxiliary 4Fe-5S Cluster for Sulfur Insertion.
J Am Chem Soc. 2024 Jan 24;146(3):1860-1873. doi: 10.1021/jacs.3c05481. Epub 2024 Jan 12.
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A Promiscuous rSAM Enzyme Enables Diverse Peptide Cross-linking.
ACS Bio Med Chem Au. 2023 Aug 15;3(6):480-493. doi: 10.1021/acsbiomedchemau.3c00043. eCollection 2023 Dec 20.

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