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揭示聚球藻对磷缺乏的反应:来自基因组分析和功能表征的见解

Unveiling Crocosphaera Responses to Phosphorus Depletion: Insights From Genome Analysis and Functional Characterization.

作者信息

Caille Chloé, Rabouille Sophie, Ortega-Retuerta Eva, Denis Yann, Crispi Olivier, Marie Barbara, Pujo-Pay Mireille, Daric Vladimir, Talla Emmanuel, Latifi Amel

机构信息

Sorbonne Université, CNRS, Laboratoire D'océanographie Microbienne, LOMIC, Banyuls-sur-Mer, France.

Aix Marseille Univ, CNRS, Laboratoire de Chimie Bactérienne LCB, IMM, Marseille, France.

出版信息

Environ Microbiol. 2025 Jul;27(7):e70153. doi: 10.1111/1462-2920.70153.

DOI:10.1111/1462-2920.70153
PMID:40660640
Abstract

Unicellular, nitrogen-fixing cyanobacteria (UCYN) thrive and support primary production in oligotrophic oceans, playing a significant role in the marine nitrogen cycle. Crocosphaera sp., a model organism for studying marine nitrogen fixation, is adapted to low phosphate (P) concentrations. Yet, how Crocosphaera copes with P depletion is rather poorly understood. We present a genomics analysis of P stress-responsive genes in this genus, encompassing six C. watsonii and two strains isolated in coastal environments, C. subtropica and C. chwakensis. We identified genes involved in P signalling and uptake, and dissolved organic phosphorus (DOP) hydrolysis. Results showed different genetic potentials to cope with P scarcity between the Crocosphaera strains. Physiological monitoring of cultures of C. watsonii WH8501 exposed to P depletion highlighted a capacity to survive for at least nine days, albeit with a skewed C:N:P stoichiometry. Upon addition of DOP, cultures efficiently recovered to a growth rate and cell composition equivalent to those observed under favourable conditions. The concomitant transcription analysis revealed diel expression patterns of P-related genes and endogenous clock genes, suggesting a possible circadian regulation. Our data deepen our understanding of the growth strategies Crocosphaera employs in P-limited environments, offering broader insights into microbial resilience in marine ecosystems.

摘要

单细胞固氮蓝细菌(UCYN)在贫营养海洋中大量繁殖并支持初级生产,在海洋氮循环中发挥着重要作用。作为研究海洋固氮的模式生物,聚球藻属适应低磷(P)浓度环境。然而,人们对聚球藻如何应对磷缺乏的了解相当有限。我们对该属中磷胁迫响应基因进行了基因组学分析,涵盖六个沃氏聚球藻菌株以及在沿海环境中分离出的两个菌株,即亚热带聚球藻和乔氏聚球藻。我们鉴定出了参与磷信号传导、摄取以及溶解有机磷(DOP)水解的基因。结果表明,聚球藻菌株之间应对磷缺乏的遗传潜力有所不同。对处于磷缺乏环境中的沃氏聚球藻WH8501培养物进行的生理监测突出显示,尽管碳氮磷化学计量比不均衡,但它仍有能力存活至少九天。添加DOP后,培养物能有效恢复到与在有利条件下观察到的生长速率和细胞组成相当的状态。同时进行的转录分析揭示了磷相关基因和内源性生物钟基因的昼夜表达模式,表明可能存在昼夜节律调节。我们的数据加深了我们对聚球藻在磷限制环境中所采用生长策略的理解,为深入了解海洋生态系统中微生物的恢复力提供了更广阔的视角。

相似文献

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Unveiling Crocosphaera Responses to Phosphorus Depletion: Insights From Genome Analysis and Functional Characterization.揭示聚球藻对磷缺乏的反应:来自基因组分析和功能表征的见解
Environ Microbiol. 2025 Jul;27(7):e70153. doi: 10.1111/1462-2920.70153.
2
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本文引用的文献

1
A distinct, high-affinity, alkaline phosphatase facilitates occupation of P-depleted environments by marine picocyanobacteria.一种独特的、高亲和力的碱性磷酸酶促进海洋微微型蓝藻在磷耗尽环境中的定殖。
Proc Natl Acad Sci U S A. 2024 May 14;121(20):e2312892121. doi: 10.1073/pnas.2312892121. Epub 2024 May 7.
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Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
双 ABC ATP 酶对碳-磷裂合酶机械结构的重塑。
Nat Commun. 2023 Feb 22;14(1):1001. doi: 10.1038/s41467-023-36604-y.
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Phosphate limitation intensifies negative effects of ocean acidification on globally important nitrogen fixing cyanobacterium.磷酸盐限制加剧了海洋酸化对全球重要固氮蓝藻的负面影响。
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Global and seasonal variation of marine phosphonate metabolism.海洋膦酸酯代谢的全球和季节性变化。
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Organic Phosphorus Scavenging Supports Efficient Growth of Diazotrophic Cyanobacteria Under Phosphate Depletion.有机磷清除支持缺磷条件下固氮蓝藻的高效生长。
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Proc Natl Acad Sci U S A. 2022 Mar 15;119(11):e2113386119. doi: 10.1073/pnas.2113386119. Epub 2022 Mar 7.
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Transcriptional responses of Trichodesmium to natural inverse gradients of Fe and P availability.铁和磷供应的自然逆向梯度对束毛藻转录反应的影响。
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