Iyyappan Rajan, Niu Yichi, Hao Ming, Pajdzik Kinga, Rakestraw Noah R, Jain Piyush K, He Chuan, Zong Chenghang, Jiang Zongliang
Department of Animal Sciences, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL, 32610, USA.
Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.
bioRxiv. 2025 Jul 10:2025.07.07.663558. doi: 10.1101/2025.07.07.663558.
RNA -methyladenosine (mA) plays a crucial role in regulating gene expression during early embryonic development. However, the mA dynamics at single-nucleotide resolution in preimplantation development remain uncharacterized, and the functional significance of site specific mA modifications in key developmental regulators is largely unknown. Here, using SAC-seq, a single-base resolution, antibody-independent mA profiling method, we generate the first comprehensive mA landscape in bovine oocytes and preimplantation embryos. We identify a previously uncharacterized mA site in RPL12 transcript that is essential for embryonic development. Loss of mA at this site leads to reduced protein synthesis, disrupted expression of translation-related genes, and impaired zygotic genome activation and blastocyst formation. Notably, supplementation with wild-type mRNA fails to rescue the developmental arrest, indicating that mA regulation extends beyond transcript abundance. Our findings provide a valuable resource of mA at single-nucleotide resolution in mammalian embryogenesis and uncover a critical mechanism by which precise, site-specific mA regulates translation and developmental competence in early embryos.
RNA甲基腺苷(mA)在早期胚胎发育过程中对基因表达的调控起着至关重要的作用。然而,着床前发育过程中单个核苷酸分辨率下的mA动态变化仍未得到表征,关键发育调节因子中位点特异性mA修饰的功能意义也 largely未知。在这里,我们使用SAC-seq,一种单碱基分辨率、不依赖抗体的mA分析方法,在牛卵母细胞和着床前胚胎中生成了首个全面的mA图谱。我们在RPL12转录本中鉴定出一个先前未表征的mA位点,该位点对胚胎发育至关重要。该位点的mA缺失会导致蛋白质合成减少、翻译相关基因的表达紊乱,以及合子基因组激活和囊胚形成受损。值得注意的是,补充野生型mRNA无法挽救发育停滞,这表明mA调控超出了转录本丰度的范围。我们的研究结果提供了哺乳动物胚胎发生中单个核苷酸分辨率下的mA宝贵资源,并揭示了精确的位点特异性mA调节早期胚胎翻译和发育能力的关键机制。