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作为真菌激酶Yck2抑制剂的二芳基吡唑类化合物的构效关系

Structure-activity Relationship for Diarylpyrazoles as Inhibitors of the Fungal Kinase Yck2.

作者信息

Shirley David J, Yiu Bonnie, Mancera-Ortiz Ikeer, Stogios Peter J, Liu Zhongle, Robbins Nicole, Whitesell Luke, Cowen Leah E, Drewry David H, Willson Timothy M

机构信息

Structural Genomics Consortium and Division of Chemical Biology and Medicinal Chemistry, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

Department of Molecular Genetics, University of Toronto, Toronto, ON, M5G 1M1, Canada.

出版信息

bioRxiv. 2025 Jul 12:2025.07.12.664496. doi: 10.1101/2025.07.12.664496.

DOI:10.1101/2025.07.12.664496
PMID:40672256
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12265645/
Abstract

Candida albicans is a growing global health threat, causing 1.5 million invasive infections and 1 million deaths annually. Yeast casein kinase 2 (Yck2) in has emerged as an antifungal target of the kinase inhibitor LY364947 (). Herein, we report Yck2 structure-activity relationships for 3,4- and 3,4,5-substituted pyrazole analogs of . X-ray crystallography and in vitro profiling revealed the importance of the hinge-binding heterocycle for Yck2 inhibition and fungal kinome selectivity. A hydrogen-bond network between the inhibitor, a bound water molecule, and catalytic residues within the ATP pocket was identified as a key determinant of selectivity over other fungal and human kinases. Phenol analog showed remarkable selectivity for Yck2 and Yck22 over all other protein kinases. Several of the analogs, including , demonstrated improved antifungal activity. These findings provide a framework for translating human kinase inhibitors into highly selective antifungal Yck2 inhibitors.

摘要

白色念珠菌对全球健康构成的威胁日益严重,每年导致150万例侵袭性感染和100万人死亡。酵母酪蛋白激酶2(Yck2)已成为激酶抑制剂LY364947的抗真菌靶点。在此,我们报告了LY364947的3,4-和3,4,5-取代吡唑类似物的Yck2构效关系。X射线晶体学和体外分析揭示了铰链结合杂环对Yck2抑制和真菌激酶组选择性的重要性。抑制剂、结合水分子和ATP口袋内催化残基之间的氢键网络被确定为对其他真菌和人类激酶具有选择性的关键决定因素。酚类类似物对Yck2和Yck22表现出对所有其他蛋白激酶的显著选择性。包括LY364947在内的几种类似物表现出改善的抗真菌活性。这些发现为将人类激酶抑制剂转化为高选择性抗真菌Yck2抑制剂提供了框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/7729aae8f450/nihpp-2025.07.12.664496v1-f0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/f17fc176f402/nihpp-2025.07.12.664496v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/1df68935e3a1/nihpp-2025.07.12.664496v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/3410047eef4d/nihpp-2025.07.12.664496v1-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/81638fbc73b7/nihpp-2025.07.12.664496v1-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/7729aae8f450/nihpp-2025.07.12.664496v1-f0011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/f17fc176f402/nihpp-2025.07.12.664496v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/1df68935e3a1/nihpp-2025.07.12.664496v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/3410047eef4d/nihpp-2025.07.12.664496v1-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/81638fbc73b7/nihpp-2025.07.12.664496v1-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6967/12265645/7729aae8f450/nihpp-2025.07.12.664496v1-f0011.jpg

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本文引用的文献

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J Med Chem. 2025 Apr 10;68(7):7615-7629. doi: 10.1021/acs.jmedchem.5c00097. Epub 2025 Mar 20.
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Structure-guided optimization of small molecules targeting Yck2 as a strategy to combat Candida albicans.以结构为导向优化靶向Yck2的小分子作为对抗白色念珠菌的一种策略。
Nat Commun. 2025 Mar 4;16(1):2156. doi: 10.1038/s41467-025-57346-z.
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DYRK-family kinases regulate morphogenesis and virulence through the Ras1/PKA pathway.
DYRK 家族激酶通过 Ras1/PKA 途径调节形态发生和毒力。
mBio. 2023 Dec 19;14(6):e0218323. doi: 10.1128/mbio.02183-23. Epub 2023 Nov 28.
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Discovery of Potent and Exquisitely Selective Inhibitors of Kinase CK1 with Tunable Isoform Selectivity.发现具有可调节亚型选择性的强效且高度选择性的激酶CK1抑制剂。
Angew Chem Int Ed Engl. 2023 Mar 6;62(11):e202217532. doi: 10.1002/anie.202217532. Epub 2023 Feb 2.
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Functional analysis of the kinome reveals Hrr25 as a regulator of antifungal susceptibility.激酶组的功能分析表明Hrr25是抗真菌易感性的调节因子。
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Kinome analyses of Candida albicans, C. parapsilosis and C. tropicalis enable novel kinases as therapeutic drug targets in candidiasis.白色念珠菌、近平滑念珠菌和热带念珠菌的激酶组学分析使新型激酶成为念珠菌病的治疗药物靶点。
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