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嗜碱芽孢杆菌RecJ(BaRecJ)可推动酿酒酵母的适应性进化。

Bacillus alcalophilus RecJ (BaRecJ) can drive the adaptive evolution of S. cerevisiae.

作者信息

Shang Jixiang, Zhang Yanchao, Xu Zongjun, Zhang Shouqing, Sun Zhongtao, Zheng Minggang

机构信息

First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.

College of Life Science, Shandong Agricultural University, Tai'an, 271018, China.

出版信息

Biotechnol Lett. 2025 Jul 22;47(4):80. doi: 10.1007/s10529-024-03552-6.

DOI:10.1007/s10529-024-03552-6
PMID:40694263
Abstract

With the continuous advancement of technologies such as microbial cultivation, DNA sequencing, bioinformatics, and genetic engineering, in vivo mutagenesis methods based on perturbation factors are now widely utilized. We identified a RecJ enzyme (BaRecJ) with endonuclease and exonuclease activities from Bacillus alcalophilus, and established a broad-spectrum mutagenic method based on the endonuclease and exonuclease activities of BaRecJ. The BaRecJ mutagenesis method was applied to S cerevisiae to enhance its ethanol or acetic acid tolerance, resulting in mutant strains with improved fermentation performance. Genomic resequencing analysis summarized genes possibly associated with the tolerance of mutants. BaRecJ mutagenesis method not only holds immense potential in microbial mutagenesis breeding and adaptive evolution but also, when coupled with genomic resequencing, allows for the rapid identification of candidate genetic loci associated with specific traits.

摘要

随着微生物培养、DNA测序、生物信息学和基因工程等技术的不断进步,基于扰动因子的体内诱变方法如今得到了广泛应用。我们从嗜碱芽孢杆菌中鉴定出一种具有内切酶和外切酶活性的RecJ酶(BaRecJ),并基于BaRecJ的内切酶和外切酶活性建立了一种广谱诱变方法。将BaRecJ诱变方法应用于酿酒酵母以提高其乙醇或乙酸耐受性,从而获得了发酵性能得到改善的突变菌株。基因组重测序分析总结了可能与突变体耐受性相关的基因。BaRecJ诱变方法不仅在微生物诱变育种和适应性进化方面具有巨大潜力,而且与基因组重测序相结合时,还能快速鉴定与特定性状相关的候选基因位点。

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Manipulating cell flocculation-associated protein kinases in Saccharomyces cerevisiae enables improved stress tolerance and efficient cellulosic ethanol production.在酿酒酵母中操纵与细胞絮凝相关的蛋白激酶可提高其耐受应激的能力和实现高效的纤维素乙醇生产。
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Development of multiple inhibitor tolerant yeast via adaptive laboratory evolution for sustainable bioethanol production.通过适应性实验室进化开发多重抑制剂耐受酵母,以实现可持续的生物乙醇生产。
Bioresour Technol. 2022 Jan;344(Pt B):126247. doi: 10.1016/j.biortech.2021.126247. Epub 2021 Nov 2.
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Advanced strategies and tools to facilitate and streamline microbial adaptive laboratory evolution.
促进和简化微生物适应性实验室进化的高级策略和工具。
Trends Biotechnol. 2022 Jan;40(1):38-59. doi: 10.1016/j.tibtech.2021.04.002. Epub 2021 May 3.
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Coexistence of endonuclease and exonuclease activities in a novel RecJ from Bacillus cereus.新型芽胞杆菌 RecJ 内切酶和外切酶活性的共存。
Biotechnol Lett. 2021 Jul;43(7):1349-1355. doi: 10.1007/s10529-021-03107-z. Epub 2021 Mar 10.
5
RecJ from Bacillus halodurans possesses endonuclease activity at moderate temperature.来源于嗜盐杆菌的 RecJ 在中等温度下具有核酸内切酶活性。
FEBS Lett. 2020 Jul;594(14):2303-2310. doi: 10.1002/1873-3468.13809. Epub 2020 Jun 15.
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Role of DHH superfamily proteins in nucleic acids metabolism and stress tolerance in prokaryotes and eukaryotes.DHH 超家族蛋白在原核生物和真核生物中核酸代谢和应激耐受中的作用。
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Rationally designed perturbation factor drives evolution in Saccharomyces cerevisiae for industrial application.理性设计的扰动因子驱动酿酒酵母进化用于工业应用。
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Food Res Int. 2018 Jun;108:83-92. doi: 10.1016/j.foodres.2018.03.036. Epub 2018 Mar 13.
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