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磷酸果糖激酶M(PFKM)使组蛋白H3磷酸化,并通过感知柠檬酸水平促进有丝分裂进程。

PFKM phosphorylates histone H3 and promotes mitotic progression by sensing the levels of citrate.

作者信息

Lin Pianpian, Qi Yijun, Chu Huiying, Wu Hongyu, Zhang Yajuan, Huang Xiaolan, Li Chen, Xu Xiaoyan, Gao Hong, Zeng Rong, Li Guohui, Yang Weiwei

机构信息

Key Laboratory of Multi-cell Systems, Shanghai Key Laboratory of Molecular Andrology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences, Shanghai Institute of Biochemistry and Cell Biology, Shanghai, China.

Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China.

出版信息

Nat Commun. 2025 Jul 22;16(1):6736. doi: 10.1038/s41467-025-62111-3.

DOI:10.1038/s41467-025-62111-3
PMID:40695785
Abstract

Emerging evidence indicates that metabolic signals-including nutrient availability, biosynthetic intermediates, and energy balance-are linked to cell cycle progression. However, how these signals are sensed by the cell cycle machinery remains unclear. Citrate, a key intermediate in the TCA cycle, peaks during mitosis (M phase) and is detected by the glycolytic enzyme ATP-dependent 6-phosphofructokinase 1 muscle isoform (PFKM), accelerating mitotic progression. Mechanistically, citrate binds PFKM, disrupting its tetrameric structure into dimers. Dimeric PFKM interacts with nucleosomes and phosphorylates histone H3 at serine 10 (H3S10), functioning as a protein kinase to promote mitosis and cell proliferation. Structural simulations reveal that PFKM binds nucleosomes optimally when H3S10 aligns with its catalytic site. Disrupting citrate-PFKM or PFKM-H3 interactions reduces H3S10 phosphorylation, delays mitosis, and suppresses tumor growth and T-cell proliferation. Our findings demonstrate that PFKM acts as a citrate sensor, coupling metabolic signals to cell cycle regulation.

摘要

新出现的证据表明,代谢信号——包括营养物质可用性、生物合成中间体和能量平衡——与细胞周期进程相关联。然而,细胞周期机制如何感知这些信号仍不清楚。柠檬酸是三羧酸循环中的关键中间体,在有丝分裂(M期)达到峰值,并被糖酵解酶ATP依赖性6-磷酸果糖激酶1肌肉亚型(PFKM)检测到,从而加速有丝分裂进程。从机制上讲,柠檬酸与PFKM结合,将其四聚体结构破坏成二聚体。二聚体PFKM与核小体相互作用,并使组蛋白H3的丝氨酸10(H3S10)磷酸化,作为一种蛋白激酶促进有丝分裂和细胞增殖。结构模拟显示,当H3S10与其催化位点对齐时,PFKM能最佳地结合核小体。破坏柠檬酸-PFKM或PFKM-H3相互作用会减少H3S10磷酸化,延迟有丝分裂,并抑制肿瘤生长和T细胞增殖。我们的研究结果表明,PFKM作为一种柠檬酸传感器,将代谢信号与细胞周期调控联系起来。

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本文引用的文献

1
Glycolytic enzyme PFKL governs lipolysis by promoting lipid droplet-mitochondria tethering to enhance β-oxidation and tumor cell proliferation.糖酵解酶 PFKL 通过促进脂滴-线粒体的连接来增强β-氧化和肿瘤细胞增殖,从而调控脂解作用。
Nat Metab. 2024 Jun;6(6):1092-1107. doi: 10.1038/s42255-024-01047-2. Epub 2024 May 21.
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The bidirectional relationship between metabolism and cell cycle control.代谢与细胞周期控制的双向关系。
Trends Cell Biol. 2024 Feb;34(2):136-149. doi: 10.1016/j.tcb.2023.05.012. Epub 2023 Jun 27.
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Lactate regulates cell cycle by remodelling the anaphase promoting complex.
乳酸通过重塑后期促进复合物来调节细胞周期。
Nature. 2023 Apr;616(7958):790-797. doi: 10.1038/s41586-023-05939-3. Epub 2023 Mar 15.
4
Glycolytic Pfkp acts as a Lin41 protein kinase to promote endodermal differentiation of embryonic stem cells.糖酵解 Pfkp 作为 Lin41 蛋白激酶促进胚胎干细胞的内胚层分化。
EMBO Rep. 2023 Mar 6;24(3):e55683. doi: 10.15252/embr.202255683. Epub 2023 Jan 20.
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Regulation and function of the mammalian tricarboxylic acid cycle.哺乳动物三羧酸循环的调控与功能。
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Metabolic oscillations during cell-cycle progression.细胞周期进程中的代谢波动。
Trends Endocrinol Metab. 2022 Jul;33(7):447-450. doi: 10.1016/j.tem.2022.04.006. Epub 2022 May 7.
7
Blockage of citrate export prevents TCA cycle fragmentation via Irg1 inactivation.柠檬酸外排受阻通过 Irg1 失活防止 TCA 循环碎片化。
Cell Rep. 2022 Feb 15;38(7):110391. doi: 10.1016/j.celrep.2022.110391.
8
Extracellular citrate and metabolic adaptations of cancer cells.细胞外柠檬酸和癌细胞的代谢适应。
Cancer Metastasis Rev. 2021 Dec;40(4):1073-1091. doi: 10.1007/s10555-021-10007-1. Epub 2021 Dec 21.
9
Mitogen-induced transcriptional programming in human fibroblasts.有丝分裂原诱导的人成纤维细胞中的转录编程。
Gene. 2021 Oct 20;800:145842. doi: 10.1016/j.gene.2021.145842. Epub 2021 Jul 16.
10
Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.