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前瞻性呼吸窘迫队列中新生儿急性呼吸窘迫综合征的转录组特征

Transcriptomic signatures of neonatal acute respiratory distress syndrome in a prospective cohort of respiratory distress.

作者信息

Liu Chan, Ai Qing, Yang Jingli, Fan Ying, Jia Wen, Si Leyu, Yao Yuting, Chen Feifan, Liu Shiyue, He Yu, Shi Yuan

机构信息

Department of Neonatology, Children's Hospital of Chongqing Medical University, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, China International Science and Technology Cooperation Base of Child Development and Critical Disorders, Chongqing Key Laboratory of Child Rare Diseases in Infection and Immunity, Chongqing 400014, China.

出版信息

iScience. 2025 Jun 25;28(8):113007. doi: 10.1016/j.isci.2025.113007. eCollection 2025 Aug 15.

DOI:10.1016/j.isci.2025.113007
PMID:40697828
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12281067/
Abstract

Neonatal acute respiratory distress syndrome (NARDS) is challenging to differentiate from other respiratory conditions, and gestational age (GA) may influence gene expression. This study characterized whole blood transcriptomic profiles of NARDS in a pilot cohort of 48 neonates with respiratory distress, demonstrating a significant GA-dependent modulation of gene expression. Functional analyses revealed prominent involvement of interferon-related pathways in NARDS, with greater suppression in neonates born before 34 weeks. Immune cell infiltration was observed in term or late preterm neonates but was absent in more preterm cases. Machine learning identified three key predictive genes, among which and were validated in an independent cohort, with area under the curve ranging from 0.68 to 0.83 across different GAs. The gene changes were also confirmed in a neonatal lipopolysaccharide-induced lung injury mouse model. These findings highlight the potential predictive and therapeutic value of and for NARDS.

摘要

新生儿急性呼吸窘迫综合征(NARDS)与其他呼吸系统疾病的鉴别具有挑战性,且胎龄(GA)可能会影响基因表达。本研究对48例有呼吸窘迫的新生儿组成的试验队列中的NARDS全血转录组谱进行了特征分析,结果表明基因表达存在显著的GA依赖性调节。功能分析显示干扰素相关通路在NARDS中显著参与,在34周前出生的新生儿中抑制作用更强。足月儿或晚期早产儿中观察到免疫细胞浸润,但在更早出生的病例中未观察到。机器学习确定了三个关键预测基因,其中 和 在一个独立队列中得到验证,在不同GA下曲线下面积范围为0.68至0.83。在新生儿脂多糖诱导的肺损伤小鼠模型中也证实了基因变化。这些发现突出了 和 对NARDS的潜在预测和治疗价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/b0af1271ed3a/gr6.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/b0af1271ed3a/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/a4d8dc6fa623/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/639ed3a6679b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/43a40f929025/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/0a4d00b89372/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/6afcd37475c9/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/831b/12281067/2c0953eb4ac1/gr5.jpg
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本文引用的文献

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The developing immune system in preterm born infants: From contributor to potential solution for respiratory tract infections and wheezing.早产儿发育中的免疫系统:从呼吸道感染和喘息的促成因素到潜在的解决方案。
Allergy. 2024 Nov;79(11):2924-2942. doi: 10.1111/all.16342. Epub 2024 Oct 9.
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Reduced microRNA-744 expression in mast cell-derived exosomes triggers epithelial cell ferroptosis in acute respiratory distress syndrome.肥大细胞来源的细胞外囊泡中 miR-744 表达降低触发急性呼吸窘迫综合征中上皮细胞的铁死亡。
Redox Biol. 2024 Nov;77:103387. doi: 10.1016/j.redox.2024.103387. Epub 2024 Oct 3.
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Single-cell transcriptomic analysis reveals heterogeneous features of myeloid-derived suppressor cells in newborns.
单细胞转录组分析揭示了新生儿髓系来源抑制细胞的异质性特征。
Front Immunol. 2024 Jun 11;15:1367230. doi: 10.3389/fimmu.2024.1367230. eCollection 2024.
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γδ T cell profiling in a cohort of preterm infants reveals elevated frequencies of CD83+ γδ T cells in sepsis.γδ T 细胞谱分析显示,在一组早产儿中,败血症患者 CD83+ γδ T 细胞频率升高。
J Exp Med. 2024 Jul 1;221(7). doi: 10.1084/jem.20231987. Epub 2024 May 16.
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Heterogeneity of immune cells and their communications unveiled by transcriptome profiling in acute inflammatory lung injury.急性炎症性肺损伤中转录组谱分析揭示的免疫细胞异质性及其通讯。
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Single-cell atlas of healthy human blood unveils age-related loss of NKG2CGZMBCD8 memory T cells and accumulation of type 2 memory T cells.健康人类血液单细胞图谱揭示了与年龄相关的 NKG2CGZMBCD8 记忆 T 细胞丢失和 2 型记忆 T 细胞积累。
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