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美国国立癌症研究所影像数据共享库中乳腺癌、脑癌、肝癌、肺癌和前列腺癌数据集的人工智能生成注释。

AI generated annotations for Breast, Brain, Liver, Lungs, and Prostate cancer collections in the National Cancer Institute Imaging Data Commons.

作者信息

Murugesan Gowtham Krishnan, McCrumb Diana, Soni Rahul, Kumar Jithendra, Nuernberg Leonard, Pei Linmin, Wagner Ulrike, Granger Sutton, Fedorov Andrey Y, Moore Stephen, Van Oss Jeff

机构信息

BAMF Health, Grand Rapids, MI, USA.

Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.

出版信息

Sci Data. 2025 Jul 29;12(1):1317. doi: 10.1038/s41597-025-05666-6.

DOI:10.1038/s41597-025-05666-6
PMID:40730795
Abstract

The Artificial Intelligence in Medical Imaging (AIMI) initiative aims to enhance the National Cancer Institute's (NCI) Image Data Commons (IDC) by releasing fully reproducible nnU-Net models, along with AI-assisted segmentation for cancer radiology images. In this extension of our earlier work, we created high-quality, AI-annotated imaging datasets for 11 IDC collections, spanning computed tomography (CT) and magnetic resonance imaging (MRI) of the lungs, breast, brain, kidneys, prostate, and liver. Each nnU-Net model was trained on open-source datasets, and a portion of the AI-generated annotations was reviewed and corrected by board-certified radiologists. Both the AI and radiologist annotations were encoded in compliance with the Digital Imaging and Communications in Medicine (DICOM) standard, ensuring seamless integration into the IDC collections. By making these models, images, and annotations publicly accessible, we aim to facilitate further research and development in cancer imaging.

摘要

医学影像人工智能(AIMI)计划旨在通过发布完全可重现的nnU-Net模型以及癌症放射影像的人工智能辅助分割,来增强美国国立癌症研究所(NCI)的图像数据共享库(IDC)。在我们早期工作的这个扩展中,我们为11个IDC数据集创建了高质量的、由人工智能标注的成像数据集,涵盖肺部、乳腺、大脑、肾脏、前列腺和肝脏的计算机断层扫描(CT)和磁共振成像(MRI)。每个nnU-Net模型都在开源数据集上进行训练,并且一部分由人工智能生成的标注由经过委员会认证的放射科医生进行了审查和校正。人工智能和放射科医生的标注均按照医学数字成像和通信(DICOM)标准进行编码,以确保无缝集成到IDC数据集中。通过使这些模型、图像和标注公开可用,我们旨在促进癌症成像领域的进一步研究和开发。

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Sci Data. 2025 Jul 29;12(1):1317. doi: 10.1038/s41597-025-05666-6.
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本文引用的文献

1
AI-Generated Annotations Dataset for Diverse Cancer Radiology Collections in NCI Image Data Commons.NCI 图像数据共享中的多样化癌症放射学数据集的 AI 生成注释。
Sci Data. 2024 Oct 23;11(1):1165. doi: 10.1038/s41597-024-03977-8.
2
Preoperative CT and survival data for patients undergoing resection of colorectal liver metastases.结直肠肝转移患者切除术的术前 CT 和生存数据。
Sci Data. 2024 Feb 6;11(1):172. doi: 10.1038/s41597-024-02981-2.
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Enrichment of lung cancer computed tomography collections with AI-derived annotations.利用人工智能生成的标注丰富肺癌 CT 数据集。
Sci Data. 2024 Jan 4;11(1):25. doi: 10.1038/s41597-023-02864-y.
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A Survey of Publicly Available MRI Datasets for Potential Use in Artificial Intelligence Research.用于人工智能研究的公共可用 MRI 数据集调查。
J Magn Reson Imaging. 2024 Feb;59(2):450-480. doi: 10.1002/jmri.29101. Epub 2023 Oct 27.
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TotalSegmentator: Robust Segmentation of 104 Anatomic Structures in CT Images.全段分割器:CT图像中104种解剖结构的稳健分割
Radiol Artif Intell. 2023 Jul 5;5(5):e230024. doi: 10.1148/ryai.230024. eCollection 2023 Sep.
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The Liver Tumor Segmentation Benchmark (LiTS).肝脏肿瘤分割基准(LiTS)。
Med Image Anal. 2023 Feb;84:102680. doi: 10.1016/j.media.2022.102680. Epub 2022 Nov 17.
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The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, & radiomics.宾夕法尼亚大学胶质母细胞瘤(UPenn-GBM)队列:高级 MRI、临床、基因组学和放射组学。
Sci Data. 2022 Jul 29;9(1):453. doi: 10.1038/s41597-022-01560-7.
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Expert tumor annotations and radiomics for locally advanced breast cancer in DCE-MRI for ACRIN 6657/I-SPY1.ACRIN 6657/I-SPY1 中用于局部晚期乳腺癌的 DCE-MRI 的专家肿瘤注释和放射组学
Sci Data. 2022 Jul 23;9(1):440. doi: 10.1038/s41597-022-01555-4.
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The Medical Segmentation Decathlon.医学分割十项全能
Nat Commun. 2022 Jul 15;13(1):4128. doi: 10.1038/s41467-022-30695-9.
10
Position of the AI for Health Imaging (AI4HI) network on metadata models for imaging biobanks.AI 健康影像学(AI4HI)网络在影像学生物库元数据模型方面的立场。
Eur Radiol Exp. 2022 Jul 1;6(1):29. doi: 10.1186/s41747-022-00281-1.