Inkabanga Alain Tseke, Zhang Qiheng, Wang Shanshan, Li Yanni, Chen Jingyi, Huang Li, Li Xiang, Deng Zihan, Yang Xiao, Luo Mengxin, Peng Lingxia, Ren Keran, Chai Yourong, Xue Yufei
Integrative Science Center of Germplasm Creation in Western China (Chongqing) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Engineering Research Center of South Upland Agriculture, Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China.
Plants (Basel). 2025 Jul 21;14(14):2247. doi: 10.3390/plants14142247.
The RasGAP SH3 domain binding protein (G3BP) is a highly conserved family of proteins in eukaryotic organisms that coordinates signal transduction and post-transcriptional gene regulation and functions in the formation of stress granules. G3BPs have important roles in abiotic/biotic stresses in mammals, and recent research suggests that they have similar functions in higher plants. contains many important oilseeds, vegetables, and ornamental plants, but there are no reports on the family in species. In this study, we identified family genes from six species of the U's triangle (, , , , , and ) at the genome-wide level. We then analyzed their gene structure, protein motifs, gene duplication type, phylogeny, subcellular localization, SSR loci, and upstream miRNAs. Based on transcriptome data, we analyzed the expression patterns of () genes in various tissues/organs in response to disease, blackleg disease, powdery mildew, dehydration, drought, heat, cold, and ABA treatments, and its involvement in seed traits including germination, α-linolenic acid content, oil content, and yellow seed. Several DEGs might be regulated by BnaTT1. The qRT-PCR assay validated the inducibility of two cold-responsive DEGs. This study will enrich the systematic understanding of family genes and lay a molecular basis for the application of genes in stress tolerance, disease resistance, and quality improvement in rapeseed.
RasGAP SH3结构域结合蛋白(G3BP)是真核生物中一类高度保守的蛋白质家族,它协调信号转导和转录后基因调控,并在应激颗粒的形成中发挥作用。G3BPs在哺乳动物的非生物/生物胁迫中具有重要作用,最近的研究表明它们在高等植物中具有类似功能。[该植物名称]包含许多重要的油料作物、蔬菜和观赏植物,但关于[该植物名称]物种中[目标家族名称]家族的报道尚无。在本研究中,我们在全基因组水平上从[U's三角形中六种植物名称]的六个物种中鉴定了[目标家族名称]家族基因。然后我们分析了它们的基因结构、蛋白质基序、基因复制类型、系统发育、亚细胞定位、简单序列重复(SSR)位点和上游微小RNA(miRNA)。基于转录组数据,我们分析了[目标家族名称]([目标家族英文缩写])基因在各种组织/器官中对[某种疾病名称]病、黑胫病、白粉病、脱水、干旱、高温、低温和脱落酸(ABA)处理的表达模式,以及其在种子性状包括发芽、α-亚麻酸含量、油含量和黄籽方面的参与情况。几个[目标家族名称]差异表达基因(DEG)可能受BnaTT1调控。实时定量聚合酶链反应(qRT-PCR)分析验证了两个冷响应[目标家族名称]DEG的诱导性。本研究将丰富对[目标家族名称]家族基因的系统认识,并为[目标家族名称]基因在油菜的抗逆性、抗病性和品质改良中的应用奠定分子基础。