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RNA病毒发现的最新进展:当前挑战与未来展望

An Update on RNA Virus Discovery: Current Challenges and Future Perspectives.

作者信息

Debat Humberto, Bejerman Nicolas

机构信息

Instituto de Patología Vegetal, Centro de Investigaciones Agropecuarias, Instituto Nacional de Tecnología Agropecuaria (IPAVE-CIAP-INTA), Unidad de Fitopatología y Modelización Agrícola CONICET-INTA, Córdoba 5020, Argentina.

出版信息

Viruses. 2025 Jul 15;17(7):983. doi: 10.3390/v17070983.

DOI:10.3390/v17070983
PMID:40733600
Abstract

The relentless emergence of RNA viruses poses a perpetual threat to global public health, necessitating continuous efforts in surveillance, discovery, and understanding of these pathogens. This review provides a comprehensive update on recent advancements in RNA virus discovery, highlighting breakthroughs in technology and methodologies that have significantly enhanced our ability to identify novel viruses across diverse host organisms. We explore the expanding landscape of viral diversity, emphasizing the discovery of previously unknown viral families and the role of zoonotic transmissions in shaping the viral ecosystem. Additionally, we discuss the potential implications of RNA virus discovery on disease emergence and pandemic preparedness. Despite remarkable progress, current challenges in sample collection, data interpretation, and the characterization of newly identified viruses persist. Our ability to anticipate and respond to emerging respiratory threats relies on virus discovery as a cornerstone for understanding RNA virus evolution. We address these challenges and propose future directions for research, emphasizing the integration of multi-omic approaches, advanced computational tools, and international collaboration to overcome barriers in the field. This comprehensive overview aims to guide researchers, policymakers, and public health professionals in navigating the intricate landscape of RNA virus discovery, fostering a proactive and collaborative approach to anticipate and mitigate emerging viral threats.

摘要

RNA病毒的不断出现对全球公共卫生构成了持续威胁,因此需要在监测、发现和了解这些病原体方面不断努力。本综述全面更新了RNA病毒发现的最新进展,突出了技术和方法上的突破,这些突破显著提高了我们在各种宿主生物中识别新型病毒的能力。我们探讨了病毒多样性不断扩大的局面,强调了此前未知病毒科的发现以及人畜共患病传播在塑造病毒生态系统中的作用。此外,我们还讨论了RNA病毒发现对疾病出现和大流行防范的潜在影响。尽管取得了显著进展,但在样本采集、数据解读以及新发现病毒的特征描述方面,目前的挑战依然存在。我们预测和应对新出现的呼吸道威胁的能力依赖于病毒发现,这是理解RNA病毒进化的基石。我们应对这些挑战并提出未来的研究方向,强调整合多组学方法、先进的计算工具以及国际合作,以克服该领域的障碍。这一全面概述旨在指导研究人员、政策制定者和公共卫生专业人员应对RNA病毒发现的复杂局面,培养一种积极主动且协作的方法来预测和减轻新出现的病毒威胁。

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本文引用的文献

1
Climate Change and Zoonotic Disease Outbreaks: Emerging Evidence from Epidemiology and Toxicology.气候变化与动物源性疾病爆发:来自流行病学和毒理学的新证据
Int J Environ Res Public Health. 2025 May 31;22(6):883. doi: 10.3390/ijerph22060883.
2
Hidden challenges in evaluating spillover risk of zoonotic viruses using machine learning models.使用机器学习模型评估人畜共患病毒溢出风险中的潜在挑战。
Commun Med (Lond). 2025 May 20;5(1):187. doi: 10.1038/s43856-025-00903-w.
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Development of a culture-independent whole-genome sequencing of Nipah virus using the MinION Oxford Nanopore platform.
使用MinION牛津纳米孔平台开发尼帕病毒的非培养全基因组测序方法。
Microbiol Spectr. 2025 Jun 3;13(6):e0249224. doi: 10.1128/spectrum.02492-24. Epub 2025 Apr 16.
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Detection by Single-Cell RNA Sequencing of Virally Mediated Skin Diseases.通过单细胞RNA测序检测病毒介导的皮肤病
JID Innov. 2025 Jan 11;5(3):100348. doi: 10.1016/j.xjidi.2025.100348. eCollection 2025 May.
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Advances in bioinformatics and multi-omics integration: transforming viral infectious disease research in veterinary medicine.生物信息学与多组学整合的进展:变革兽医学中的病毒传染病研究
Virol J. 2025 Jan 31;22(1):22. doi: 10.1186/s12985-025-02640-x.
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Improving the reporting of metagenomic virome-scale data.改善宏基因组病毒组规模数据的报告。
Commun Biol. 2024 Dec 20;7(1):1687. doi: 10.1038/s42003-024-07212-3.
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Sensors for surveillance of RNA viruses: a One Health perspective.用于监测RNA病毒的传感器:“同一个健康”视角
Lancet Microbe. 2025 Jun;6(6):101029. doi: 10.1016/j.lanmic.2024.101029. Epub 2024 Dec 13.
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Spillover: Mechanisms, Genetic Barriers, and the Role of Reservoirs in Emerging Pathogens.溢出效应:新兴病原体中的机制、遗传屏障及宿主的作用
Microorganisms. 2024 Oct 30;12(11):2191. doi: 10.3390/microorganisms12112191.
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Using artificial intelligence to document the hidden RNA virosphere.利用人工智能记录隐藏的 RNA 病毒圈。
Cell. 2024 Nov 27;187(24):6929-6942.e16. doi: 10.1016/j.cell.2024.09.027. Epub 2024 Oct 9.
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VirID: Beyond Virus Discovery-An Integrated Platform for Comprehensive RNA Virus Characterization.VirID:超越病毒发现——一个全面的 RNA 病毒特征分析的综合平台。
Mol Biol Evol. 2024 Oct 4;41(10). doi: 10.1093/molbev/msae202.