Patharkar Atharva, Amma Meike, Isern Jaime, Chaudron Zoé, Besson-Bard Angélique, Nicolas-Francès Valérie, Rosnoblet Claire, Wendehenne David, Schmieder Peter, Fiedler Dorothea
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) Robert-Rössle-Str. 10 13125 Berlin Germany
Institut für Chemie, Humboldt-Universität zu Berlin Germany, Brook-Taylor-Str. 2 12489 Berlin Germany.
RSC Chem Biol. 2025 Jul 23. doi: 10.1039/d5cb00139k.
Inositol-(1,4,5)-trisphosphate (Ins(1,4,5)P) is a crucial secondary messenger that controls calcium (Ca) levels inside cells, yet many questions regarding Ins(1,4,5)P metabolism are challenging to address with current methods. Here, a semi-enzymatic milligram scale synthesis of isotopically labeled [C]Ins(1,4,5)P is reported which then served as a substrate to monitor the activity of mammalian type II inositol 1,4,5-trisphosphate 5-phosphatase INPP5B, using NMR spectroscopy in real time. In addition, the phosphorylation sequence catalyzed by inositol polyphosphate multikinase IPMK was confirmed using [C]Ins(1,4,5)P and 2D NMR spectroscopy. The method was subsequently applied to characterize the phosphorylation/dephosphorylation reactions of a putative inositol phosphate kinase from the alga (IPK2). IPK2 displayed 6-kinase activity towards [C]Ins(1,4,5)P, and dual 4/6- and 5-phosphatase activity towards [C]Ins(1,3,4,5,6)P. Finally, [C]Ins(1,4,5)P was utilized as an internal standard in hydrophilic liquid interaction chromatography mass spectrometry (HILIC-MS) experiments, to quantify dephosphorylation of Ins(1,4,5)P by INPP5B. [C]Ins(1,4,5)P therefore constitutes a broadly applicable analytical tool that should facilitate the characterization of Ins(1,4,5)P metabolism in the future.
肌醇 -(1,4,5)-三磷酸(Ins(1,4,5)P)是一种关键的第二信使,可控制细胞内的钙(Ca)水平,但关于Ins(1,4,5)P代谢的许多问题,用目前的方法很难解决。在此,报道了一种半酶法毫克级合成同位素标记的[C]Ins(1,4,5)P,然后将其用作底物,通过核磁共振波谱实时监测哺乳动物II型肌醇1,4,5 -三磷酸5 -磷酸酶INPP5B的活性。此外,使用[C]Ins(1,4,5)P和二维核磁共振波谱确认了肌醇多磷酸多激酶IPMK催化的磷酸化序列。该方法随后被应用于表征来自藻类的假定肌醇磷酸激酶(IPK2)的磷酸化/去磷酸化反应。IPK2对[C]Ins(1,4,5)P表现出6 -激酶活性,对[C]Ins(1,3,4,5,6)P表现出4/6 -和5 -磷酸酶双重活性。最后,[C]Ins(1,4,5)P被用作亲水液相相互作用色谱质谱(HILIC - MS)实验中的内标,以定量INPP5B对Ins(1,4,5)P的去磷酸化作用。因此,[C]Ins(1,4,5)P构成了一种广泛适用的分析工具,有望在未来促进对Ins(1,4,5)P代谢的表征。