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两个新的GRAS转录因子的鉴定及其在……中的基因表达分析

Identification of two new GRAS transcription factors and expression analysis of these genes in .

作者信息

Hou Xinwen, Wang Shuwei, Zhou Shanmin, Liu Weizhong

机构信息

School of Chemistry and Material Science, Shanxi Normal University, Taiyuan, China.

School of Life Science, Shanxi Normal University, Taiyuan, China.

出版信息

Front Plant Sci. 2025 Jul 18;16:1579338. doi: 10.3389/fpls.2025.1579338. eCollection 2025.

Abstract

is a relatively new and excellent crop, and its growth is frequently threatened by abiotic stress. genes are considered to be a plant-specific transcriptional regulatory family, which is essential for controlling aboveground and root development, as well as enhancing tolerance to abiotic stress. Phylogeny, gene structure, genomic location, conserved motif, cis-element, protein interaction, and expression pattern were all comprehensively investigated in this research of the quinoa genes. According to its structure and phylogenetic characteristics, the identified quinoa 54 GRAS members were divided into 10 subgroups. The distribution of genes on 19 quinoa chromosomes is uneven, with Chr07 and Chr18 having the largest number of genes. The quinoa GRAS family's evolution has been driven by duplication and collinearity among members. Under abiotic stress, 12 selected genes showed significant differential expression. and were most sensitive to low temperatures, HO treatment highly induced the expression of , and NaCO treatment highly induced the expression of . After conducting tissue quantification, we found that some genes exhibit tissue-specific expression patterns, with and being highly expressed in stems and and being highly expressed in leaves. In summary, this work gives valuable information for a comprehensive understanding of the functional analysis of the genome's gene family and the identification of candidate genes to improve quinoa's resistance to abiotic stress.

摘要

是一种相对较新的优良作物,其生长经常受到非生物胁迫的威胁。基因被认为是一个植物特有的转录调控家族,对于控制地上和根系发育以及增强对非生物胁迫的耐受性至关重要。在本藜麦基因研究中,对系统发育、基因结构、基因组定位、保守基序、顺式元件、蛋白质相互作用和表达模式进行了全面研究。根据其结构和系统发育特征,鉴定出的54个藜麦GRAS成员被分为10个亚组。基因在19条藜麦染色体上的分布不均匀,Chr07和Chr18上的基因数量最多。藜麦GRAS家族的进化是由成员间的重复和共线性驱动的。在非生物胁迫下,12个选定的基因表现出显著的差异表达。和对低温最敏感,HO处理高度诱导的表达,NaCO处理高度诱导的表达。进行组织定量后,我们发现一些基因表现出组织特异性表达模式,和在茎中高表达以及和在叶中高表达。总之,这项工作为全面了解基因组中基因家族的功能分析以及鉴定提高藜麦对非生物胁迫抗性的候选基因提供了有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f8f/12313677/818e94f2bd71/fpls-16-1579338-g001.jpg

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